RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 SRPRBQ9Y5M8 271 aaKnown RBP14.43□□□□□ -0.1
COL28A1-206ENST00000465339 MORC2Q9Y6X9 1032 aaPredicted RBP14.43□□□□□ -0.1
COL28A1-206ENST00000465339 CDH23Q9H251 3354 aa14.43□□□□□ -0.1
COL28A1-206ENST00000465339 MYH11P35749 1972 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 NAMPTP43490 491 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 SLC39A14Q15043 492 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 CCDC85BQ15834 202 aaPredicted RBP14.42□□□□□ -0.1
COL28A1-206ENST00000465339 PTPROQ16827 1216 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 RINT1Q6NUQ1 792 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 NOTUMQ6P988 496 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 KCNK18Q7Z418 384 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 MRPL10Q7Z7H8 261 aaKnown RBP14.42□□□□□ -0.1
COL28A1-206ENST00000465339 ZBTB8OSQ8IWT0 167 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 SYT2Q8N9I0 419 aaPredicted RBP14.42□□□□□ -0.1
COL28A1-206ENST00000465339 SLC17A8Q8NDX2 589 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 CNNM3Q8NE01 707 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 PPM1EQ8WY54 764 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 PRIMPOLQ96LW4 560 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
COL28A1-206ENST00000465339 CASD1Q96PB1 797 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 LMAN2LQ9H0V9 348 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 TYW1Q9NV66 732 aaKnown RBP14.42□□□□□ -0.1
COL28A1-206ENST00000465339 KCND2Q9NZV8 630 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 KCNG1Q9UIX4 513 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
COL28A1-206ENST00000465339 COL6A3P12111 3177 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 TSPAN1O60635 241 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 ATF7P17544 494 aaPredicted RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 GUCY2CP25092 1073 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 EFNA5P52803 228 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 CEBPZQ03701 1054 aaKnown RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 AMHR2Q16671 573 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 CSPP1Q1MSJ5 1256 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 TMEM119Q4V9L6 283 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 SPOUT1Q5T280 376 aaKnown RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 CDCA2Q69YH5 1023 aaPredicted RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 C1orf186Q6ZWK4 172 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 DEPTORQ8TB45 409 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 MRPL38Q96DV4 380 aaKnown RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 DRC1Q96MC2 740 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 USP28Q96RU2 1077 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 PLIN2Q99541 437 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 MRPL9Q9BYD2 267 aaKnown RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 CCSER1Q9C0I3 900 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 CSRNP2Q9H175 543 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 FZD8Q9H461 694 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 C17orf75Q9HAS0 396 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 RNF19AQ9NV58 838 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 PRMT7Q9NVM4 692 aaPredicted RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 FBXO2Q9UK22 296 aaPredicted RBP14.41□□□□□ -0.1
COL28A1-206ENST00000465339 PCDHB12Q9Y5F1 795 aa14.41□□□□□ -0.1
COL28A1-206ENST00000465339 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL28A1-206ENST00000465339 PLA2G4BP0C869 781 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 ARF4P18085 180 aaPredicted RBP14.4□□□□□ -0.1
COL28A1-206ENST00000465339 LAG3P18627 525 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 MARCKSP29966 332 aaPredicted RBP14.4□□□□□ -0.1
COL28A1-206ENST00000465339 NASPP49321 788 aaPredicted RBP14.4□□□□□ -0.1
COL28A1-206ENST00000465339 GRIN1Q05586 938 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 MAPK6Q16659 721 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 FAM187BQ17R55 369 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 CLLU1OSQ5K130 101 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 UBXN11Q5T124 520 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 LRRC43Q8N309 656 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 MICALL1Q8N3F8 863 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 RASSF8Q8NHQ8 419 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 HELQQ8TDG4 1101 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 BSNDQ8WZ55 320 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 CWH43Q9H720 699 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 UBN1Q9NPG3 1134 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 CCDC39Q9UFE4 941 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 PLAGL2Q9UPG8 496 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 CNTNAP2Q9UHC6 1331 aa14.4□□□□□ -0.1
COL28A1-206ENST00000465339 CARNS1A5YM72 827 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 HIP1RO75146 1068 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 NCLP19338 710 aaKnown RBP14.39□□□□□ -0.11
COL28A1-206ENST00000465339 SLC12A3P55017 1021 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 ATL3Q6DD88 541 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 LRRC55Q6ZSA7 311 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 KLHL23Q8NBE8 558 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 CPB2Q96IY4 423 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 NTPCRQ9BSD7 190 aaKnown RBP14.39□□□□□ -0.11
COL28A1-206ENST00000465339 RUSC1Q9BVN2 902 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 POLD4Q9HCU8 107 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 RBM19Q9Y4C8 960 aaKnown RBP14.39□□□□□ -0.11
COL28A1-206ENST00000465339 PHLPP2Q6ZVD8 1323 aa14.39□□□□□ -0.11
COL28A1-206ENST00000465339 CCDC169A6NNP5 214 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 K7ERI5 159 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 ACKR2O00590 384 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 GRM6O15303 877 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 B4GALT5O43286 388 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 OFD1O75665 1012 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 F13A1P00488 732 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 ITGA4P13612 1032 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 DDIT3P35638 169 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 TXLNAP40222 546 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 PEX3P56589 373 aa14.38□□□□□ -0.11
COL28A1-206ENST00000465339 UBE3AQ05086 875 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms