RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 B4GALT5O43286 388 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 GAS2O43903 313 aaKnown RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 USO1O60763 962 aaKnown RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 SKIP12755 728 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 KRT17Q04695 432 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 MBTD1Q05BQ5 628 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 ECM1Q16610 540 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 PDE12Q6L8Q7 609 aaKnown RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 MRPL43Q8N983 215 aaKnown RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 CDCA3Q99618 268 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 NGRNQ9NPE2 291 aaKnown RBP16.59■□□□□ 0.25
MRPL55-225ENST00000465268 MUTYHQ9UIF7 546 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 HES2Q9Y543 173 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 CLASP2O75122 1294 aaKnown RBP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 DGAT1O75907 488 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 ALDH7A1P49419 539 aaKnown RBP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 RAB27AP51159 221 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 ANKRD54Q6NXT1 300 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 POTEGQ6S5H5 508 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 TMEM184AQ6ZMB5 413 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 IFNLR1Q8IU57 520 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 VPS52Q8N1B4 723 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 SUSD6Q92537 303 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 IGSF21Q96ID5 467 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 ZBP1Q9H171 429 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 POLR3FQ9H1D9 316 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-225ENST00000465268 RSAD1Q9HA92 442 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 MIOSQ9NXC5 875 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 IPPQ9Y573 584 aa16.58■□□□□ 0.24
MRPL55-225ENST00000465268 TTLL13PA6NNM8 815 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 LOC730098B7Z3J9 87 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 DCXO43602 365 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 CD2BP2O95400 341 aaKnown RBP16.57■□□□□ 0.24
MRPL55-225ENST00000465268 CXCL14O95715 111 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 POMCP01189 267 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 OR52Z1P0C646 297 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
MRPL55-225ENST00000465268 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
MRPL55-225ENST00000465268 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-225ENST00000465268 MXD4Q14582 209 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-225ENST00000465268 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 PGBD4Q96DM1 585 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 POLD4Q9HCU8 107 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 HCFC2Q9Y5Z7 792 aa16.57■□□□□ 0.24
MRPL55-225ENST00000465268 ARF4P18085 180 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-225ENST00000465268 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
MRPL55-225ENST00000465268 RNASELQ05823 741 aaKnown RBP16.56■□□□□ 0.24
MRPL55-225ENST00000465268 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
MRPL55-225ENST00000465268 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
MRPL55-225ENST00000465268 BSNDQ8WZ55 320 aa16.56■□□□□ 0.24
MRPL55-225ENST00000465268 TMEM169Q96HH4 297 aa16.56■□□□□ 0.24
MRPL55-225ENST00000465268 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-225ENST00000465268 TUFT1Q9NNX1 390 aa16.56■□□□□ 0.24
MRPL55-225ENST00000465268 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-225ENST00000465268 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
MRPL55-225ENST00000465268 F8W810 466 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 ERLIN2O94905 339 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
MRPL55-225ENST00000465268 ALADP13716 330 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 CA8P35219 290 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 POU5F1BQ06416 359 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 CBX2Q14781 532 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-225ENST00000465268 IL17AQ16552 155 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 TAS1R1Q7RTX1 841 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 DDX53Q86TM3 631 aaKnown RBP16.55■□□□□ 0.24
MRPL55-225ENST00000465268 FAM184AQ8NB25 1140 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 RPGRIP1Q96KN7 1286 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 ZFP42Q96MM3 310 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 GAD1Q99259 594 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 PHF7Q9BWX1 381 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-225ENST00000465268 CSRNP2Q9H175 543 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 NXF3Q9H4D5 531 aaKnown RBP16.55■□□□□ 0.24
MRPL55-225ENST00000465268 MARCH5Q9NX47 278 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 PCDHB6Q9Y5E3 794 aa16.55■□□□□ 0.24
MRPL55-225ENST00000465268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-225ENST00000465268 ARL5CA6NH57 179 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 NRP1O14786 923 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 EDN1P05305 212 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 WEE2P0C1S8 567 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 CTSAP10619 480 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 ITGA4P13612 1032 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 EPCAMP16422 314 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 AKAP5P24588 427 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
MRPL55-225ENST00000465268 RPA1P27694 616 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 MLH1P40692 756 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 TFDP1Q14186 410 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 HERC4Q5GLZ8 1057 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-225ENST00000465268 NOTUMQ6P988 496 aa16.54■□□□□ 0.24
MRPL55-225ENST00000465268 COLGALT2Q8IYK4 626 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms