RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 MBTD1Q05BQ5 628 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 POU5F1BQ06416 359 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 TMC7Q7Z402 723 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 MRPL10Q7Z7H8 261 aaKnown RBP28.73■■■□□ 2.19
U2AF1-206ENST00000464750 URGCPQ8TCY9 931 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 TMEM169Q96HH4 297 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 NACC1Q96RE7 527 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 NRDE2Q9H7Z3 1164 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 RSAD1Q9HA92 442 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 DBR1Q9UK59 544 aaKnown RBP28.73■■■□□ 2.19
U2AF1-206ENST00000464750 KIF3AQ9Y496 699 aa28.73■■■□□ 2.19
U2AF1-206ENST00000464750 C5orf42Q9H799 3197 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 CNTNAP2Q9UHC6 1331 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 HIDE1A8MVS5 230 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 RPA1P27694 616 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 AXLP30530 894 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 RBM10P98175 930 aaKnown RBP28.72■■■□□ 2.19
U2AF1-206ENST00000464750 COASYQ13057 564 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 HAUS3Q68CZ6 603 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 MAEAQ7L5Y9 396 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 TMEM173Q86WV6 379 aaPredicted RBP28.72■■■□□ 2.19
U2AF1-206ENST00000464750 ADHFE1Q8IWW8 467 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 SMRP1Q8NCR6 262 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 VN1R2Q8NFZ6 395 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 CCDC51Q96ER9 411 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 CPB2Q96IY4 423 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 GBP3Q9H0R5 595 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 GPRC5CQ9NQ84 441 aa28.72■■■□□ 2.19
U2AF1-206ENST00000464750 EYA4O95677 639 aa28.71■■■□□ 2.19
U2AF1-206ENST00000464750 NCLP19338 710 aaKnown RBP28.71■■■□□ 2.19
U2AF1-206ENST00000464750 NOTUMQ6P988 496 aa28.71■■■□□ 2.19
U2AF1-206ENST00000464750 C4orf32Q8N8J7 132 aa28.71■■■□□ 2.19
U2AF1-206ENST00000464750 MCPH1Q8NEM0 835 aa28.71■■■□□ 2.19
U2AF1-206ENST00000464750 TMX3Q96JJ7 454 aa28.71■■■□□ 2.19
U2AF1-206ENST00000464750 EIF2AQ9BY44 585 aaKnown RBP28.71■■■□□ 2.19
U2AF1-206ENST00000464750 NFKBIZQ9BYH8 718 aa28.71■■■□□ 2.19
U2AF1-206ENST00000464750 CARNS1A5YM72 827 aa28.7■■■□□ 2.18
U2AF1-206ENST00000464750 CD2BP2O95400 341 aaKnown RBP28.7■■■□□ 2.18
U2AF1-206ENST00000464750 TOB1P50616 345 aaPredicted RBP28.7■■■□□ 2.18
U2AF1-206ENST00000464750 FXR2P51116 673 aaKnown RBP eCLIP28.7■■■□□ 2.18
U2AF1-206ENST00000464750 NCBP1Q09161 790 aaKnown RBP28.7■■■□□ 2.18
U2AF1-206ENST00000464750 SMC1AQ14683 1233 aaKnown RBP28.7■■■□□ 2.18
U2AF1-206ENST00000464750 AMHR2Q16671 573 aa28.7■■■□□ 2.18
U2AF1-206ENST00000464750 CNNM3Q8NE01 707 aa28.7■■■□□ 2.18
U2AF1-206ENST00000464750 DNAJB4Q9UDY4 337 aa28.7■■■□□ 2.18
U2AF1-206ENST00000464750 TDRD15B5MCY1 1934 aaKnown RBP28.69■■■□□ 2.18
U2AF1-206ENST00000464750 ARHGEF35A5YM69 484 aa28.69■■■□□ 2.18
U2AF1-206ENST00000464750 LRRIQ4A6NIV6 560 aa28.69■■■□□ 2.18
U2AF1-206ENST00000464750 B4GALT3O60512 393 aa28.69■■■□□ 2.18
U2AF1-206ENST00000464750 SMG8Q8ND04 991 aaKnown RBP28.69■■■□□ 2.18
U2AF1-206ENST00000464750 CSRNP2Q9H175 543 aa28.69■■■□□ 2.18
U2AF1-206ENST00000464750 IPPQ9Y573 584 aa28.69■■■□□ 2.18
U2AF1-206ENST00000464750 PCDHB6Q9Y5E3 794 aa28.69■■■□□ 2.18
U2AF1-206ENST00000464750 C19orf67A6NJJ6 358 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 GALTP07902 379 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 SRGAP2BP0DMP2 458 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 ITGA4P13612 1032 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 ARF4P18085 180 aaPredicted RBP28.68■■■□□ 2.18
U2AF1-206ENST00000464750 CA8P35219 290 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 CCT6AP40227 531 aaKnown RBP28.68■■■□□ 2.18
U2AF1-206ENST00000464750 SLC11A1P49279 550 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 AFF1P51825 1210 aaKnown RBP28.68■■■□□ 2.18
U2AF1-206ENST00000464750 ZNF280BQ86YH2 543 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 BCL7CQ8WUZ0 217 aaPredicted RBP28.68■■■□□ 2.18
U2AF1-206ENST00000464750 IGSF21Q96ID5 467 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 POP1Q99575 1024 aaKnown RBP28.68■■■□□ 2.18
U2AF1-206ENST00000464750 LRWD1Q9UFC0 647 aa28.68■■■□□ 2.18
U2AF1-206ENST00000464750 PI4K2BG5E9Z4 385 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 B4GALT5O43286 388 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 MUTP22033 750 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 PTGDRQ13258 359 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 LLGL2Q6P1M3 1020 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 PADI6Q6TGC4 694 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 TBC1D32Q96NH3 1257 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 ZBP1Q9H171 429 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 UBN1Q9NPG3 1134 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 KANSL3Q9P2N6 904 aa28.67■■■□□ 2.18
U2AF1-206ENST00000464750 USP15Q9Y4E8 981 aaPredicted RBP28.67■■■□□ 2.18
U2AF1-206ENST00000464750 C2orf71A6NGG8 1288 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 DDHD2O94830 711 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 POMCP01189 267 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 COL9A1P20849 921 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 KCNC3Q14003 757 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 BMS1Q14692 1282 aaKnown RBP28.66■■■□□ 2.18
U2AF1-206ENST00000464750 ECM1Q16610 540 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 MCTP1Q6DN14 999 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 VPS52Q8N1B4 723 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 MRPL43Q8N983 215 aaKnown RBP28.66■■■□□ 2.18
U2AF1-206ENST00000464750 FAM193BQ96PV7 902 aaPredicted RBP28.66■■■□□ 2.18
U2AF1-206ENST00000464750 TRIM6Q9C030 488 aaPredicted RBP28.66■■■□□ 2.18
U2AF1-206ENST00000464750 HES2Q9Y543 173 aa28.66■■■□□ 2.18
U2AF1-206ENST00000464750 CYP11B2P19099 503 aa28.65■■■□□ 2.18
U2AF1-206ENST00000464750 GJB2P29033 226 aa28.65■■■□□ 2.18
U2AF1-206ENST00000464750 MCM2P49736 904 aa28.65■■■□□ 2.18
U2AF1-206ENST00000464750 CDCA2Q69YH5 1023 aaPredicted RBP28.65■■■□□ 2.18
U2AF1-206ENST00000464750 TMEM184AQ6ZMB5 413 aa28.65■■■□□ 2.18
U2AF1-206ENST00000464750 DDX53Q86TM3 631 aaKnown RBP28.65■■■□□ 2.18
U2AF1-206ENST00000464750 ZBTB8OSQ8IWT0 167 aa28.65■■■□□ 2.18
U2AF1-206ENST00000464750 SNX29Q8TEQ0 813 aa28.65■■■□□ 2.18
U2AF1-206ENST00000464750 APOL6Q9BWW8 343 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms