RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 PRR5-ARHGAP8B1AHC4 643 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 HOXA3O43365 443 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 SDSP20132 328 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 SCNN1BP51168 640 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 USP14P54578 494 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 OCRLQ01968 901 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 FAM214AQ32MH5 1076 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 MBNL2Q5VZF2 373 aaKnown RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 IQSEC1Q6DN90 963 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 ESRP1Q6NXG1 681 aaKnown RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 CNNM4Q6P4Q7 775 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 UNQ6494/PRO21346Q6UXR6 183 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 KANSL1Q7Z3B3 1105 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 C11orf74Q86VG3 221 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 SYNPOQ8N3V7 929 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 SUPT20HQ8NEM7 779 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 LENG9Q96B70 501 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 PITHD1Q9GZP4 211 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 SPON1Q9HCB6 807 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 INTS7Q9NVH2 962 aaKnown RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 THG1LQ9NWX6 298 aaKnown RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 USP36Q9P275 1121 aaKnown RBP4.5□□□□□ -1.69
GARNL3-213ENST00000464616 MSRAQ9UJ68 235 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 CLCA2Q9UQC9 943 aa4.5□□□□□ -1.69
GARNL3-213ENST00000464616 TLDC2A0PJX2 215 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 TRIM24O15164 1050 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 B3GALT2O43825 422 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 DNAJC6O75061 913 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 RFPL3O75679 317 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 STC2O76061 302 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 GAAP10253 952 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 ATP2A2P16615 1042 aaKnown RBP4.49□□□□□ -1.69
GARNL3-213ENST00000464616 CASRP41180 1078 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 MXRA7P84157 204 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 SQSTM1Q13501 440 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 STRIP1Q5VSL9 837 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 UNC5BQ8IZJ1 945 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 NXPE1Q8N323 547 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 LCORLQ8N3X6 602 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 EFHBQ8N7U6 833 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 GAB3Q8WWW8 586 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 IL17RAQ96F46 866 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 HAPLN2Q9GZV7 340 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 TRPM5Q9NZQ8 1165 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 H2AFY2Q9P0M6 372 aaPredicted RBP4.49□□□□□ -1.69
GARNL3-213ENST00000464616 TRPS1Q9UHF7 1281 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 PACSIN3Q9UKS6 424 aa4.49□□□□□ -1.69
GARNL3-213ENST00000464616 LSP1P33241 339 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 GZMKP49863 264 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 WNT3AP56704 352 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 IL2P60568 153 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 CD69Q07108 199 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 LRRC32Q14392 662 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 PLEKHG4Q58EX7 1191 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 NAIF1Q69YI7 327 aaPredicted RBP4.48□□□□□ -1.69
GARNL3-213ENST00000464616 KIF18BQ86Y91 864 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 HOMER1Q86YM7 354 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 VRK3Q8IV63 474 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 GLB1L2Q8IW92 636 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 AHI1Q8N157 1196 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 CHTF18Q8WVB6 975 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 GPR101Q96P66 508 aaPredicted RBP4.48□□□□□ -1.69
GARNL3-213ENST00000464616 DCLRE1CQ96SD1 692 aaKnown RBP4.48□□□□□ -1.69
GARNL3-213ENST00000464616 CDC5LQ99459 802 aaKnown RBP4.48□□□□□ -1.69
GARNL3-213ENST00000464616 PDCD2LQ9BRP1 358 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 POGKQ9P215 609 aa4.48□□□□□ -1.69
GARNL3-213ENST00000464616 PRAMEF4O60810 478 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 LY86O95711 162 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 F2P00734 622 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 HLA-DOAP06340 250 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 SPATA31D3P0C874 917 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 GPR15P49685 360 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 MGAT5Q09328 741 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 VPS72Q15906 364 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 C21orf62-AS1Q17RA5 79 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 ERCC6LQ2NKX8 1250 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 SPATA31D4Q6ZUB0 917 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 HTR3DQ70Z44 454 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 CAVIN3Q969G5 261 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 MLST8Q9BVC4 326 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 KCNH6Q9H252 994 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 TMEM260Q9NX78 707 aa4.47□□□□□ -1.69
GARNL3-213ENST00000464616 A0A0A6YYK5 440 aaPredicted RBP4.46□□□□□ -1.7
GARNL3-213ENST00000464616 ZNF891A8MT65 544 aaPredicted RBP4.46□□□□□ -1.7
GARNL3-213ENST00000464616 RNASET2O00584 256 aaKnown RBP4.46□□□□□ -1.7
GARNL3-213ENST00000464616 ENPP3O14638 875 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 KRT4P19013 534 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 HSD3B2P26439 372 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 AVPR1BP47901 424 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 TAP1Q03518 808 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 DDB1Q16531 1140 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 CCDC178Q5BJE1 867 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 METTL24Q5JXM2 366 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 LRRTM3Q86VH5 581 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 PIK3C3Q8NEB9 887 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 OR2W6PQ8NHA6 318 aa4.46□□□□□ -1.7
GARNL3-213ENST00000464616 APPBP2Q92624 585 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms