RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 EIF2AQ9BY44 585 aaKnown RBP21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 NRDE2Q9H7Z3 1164 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 RSAD1Q9HA92 442 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 BDP1A6H8Y1 2624 aa21.41■■□□□ 1.02
CCHCR1-210ENST00000464012 LRRIQ4A6NIV6 560 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 XRCC6P12956 609 aaKnown RBP eCLIP21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 U2AF2P26368 475 aaKnown RBP eCLIP21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 ZP2Q05996 745 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 MBTD1Q05BQ5 628 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 SMAD2Q15796 467 aaKnown RBP21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 LLGL2Q6P1M3 1020 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 TMEM173Q86WV6 379 aaPredicted RBP21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 VN1R2Q8NFZ6 395 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 TMX3Q96JJ7 454 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 NACC1Q96RE7 527 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 CDCA3Q99618 268 aaPredicted RBP21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 DNAJB4Q9UDY4 337 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 DBR1Q9UK59 544 aaKnown RBP21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 KIF3AQ9Y496 699 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 PCDHB6Q9Y5E3 794 aa21.4■■□□□ 1.02
CCHCR1-210ENST00000464012 ARHGEF35A5YM69 484 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 RPA1P27694 616 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 AXLP30530 894 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 CCT6AP40227 531 aaKnown RBP21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 AFF1P51825 1210 aaKnown RBP21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 NCBP1Q09161 790 aaKnown RBP21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 HAUS3Q68CZ6 603 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 NOTUMQ6P988 496 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 IFNLR1Q8IU57 520 aaPredicted RBP21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 ADHFE1Q8IWW8 467 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 RSPH1Q8WYR4 309 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 APOL6Q9BWW8 343 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 C1QTNF1Q9BXJ1 281 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 NGRNQ9NPE2 291 aaKnown RBP21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 PRKAG3Q9UGI9 489 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 IPPQ9Y573 584 aa21.39■■□□□ 1.01
CCHCR1-210ENST00000464012 CNTNAP2Q9UHC6 1331 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 B4GALT5O43286 388 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 B4GALT3O60512 393 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 POMCP01189 267 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 ITGA4P13612 1032 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 NCLP19338 710 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 GJB2P29033 226 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 TOB1P50616 345 aaPredicted RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 PTGDRQ13258 359 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 SMC1AQ14683 1233 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 MRPL10Q7Z7H8 261 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 CDR2LQ86X02 465 aaPredicted RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 ZNF280BQ86YH2 543 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 C4orf32Q8N8J7 132 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 SMRP1Q8NCR6 262 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 SMG8Q8ND04 991 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 MCPH1Q8NEM0 835 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 BCL7CQ8WUZ0 217 aaPredicted RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 TRIM6Q9C030 488 aaPredicted RBP21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 LRWD1Q9UFC0 647 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 HES2Q9Y543 173 aa21.38■■□□□ 1.01
CCHCR1-210ENST00000464012 FSD2A1L4K1 749 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 FAM86C2PA6NEL3 165 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 GALTP07902 379 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 ARF4P18085 180 aaPredicted RBP21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 SLC11A1P49279 550 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 FXR2P51116 673 aaKnown RBP eCLIP21.37■■□□□ 1.016e-7■□□□□ 9.4
CCHCR1-210ENST00000464012 POU5F1BQ06416 359 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 COASYQ13057 564 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 PCBP1Q15365 356 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 ECM1Q16610 540 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 AMHR2Q16671 573 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 PADI6Q6TGC4 694 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 AUTS2Q8WXX7 1259 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 IGSF21Q96ID5 467 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 FAM193BQ96PV7 902 aaPredicted RBP21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 CSRNP2Q9H175 543 aa21.37■■□□□ 1.01
CCHCR1-210ENST00000464012 DDHD2O94830 711 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 EYA4O95677 639 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 SRGAP2BP0DMP2 458 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 COL9A1P20849 921 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 VPS52Q8N1B4 723 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 CNNM3Q8NE01 707 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 SNX29Q8TEQ0 813 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 CCDC51Q96ER9 411 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 TBC1D32Q96NH3 1257 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 APOL5Q9BWW9 433 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 NFKBIZQ9BYH8 718 aa21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 NXF3Q9H4D5 531 aaKnown RBP21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 USP15Q9Y4E8 981 aaPredicted RBP21.36■■□□□ 1.01
CCHCR1-210ENST00000464012 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 C2orf71A6NGG8 1288 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 H3BQV1 296 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 NPTXRO95502 500 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 LIG1P18858 919 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 MLH1P40692 756 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 ZBTB8OSQ8IWT0 167 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 BSNDQ8WZ55 320 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 POP1Q99575 1024 aaKnown RBP21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 RAB34Q9BZG1 259 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 ZBP1Q9H171 429 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 RNF39Q9H2S5 420 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 POLD4Q9HCU8 107 aa21.35■■□□□ 1.01
CCHCR1-210ENST00000464012 DDX19AQ9NUU7 478 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms