RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 SLC12A6Q9UHW9 1150 aa12.64□□□□□ -0.39
RBM39-223ENST00000463004 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
RBM39-223ENST00000463004 NUP188Q5SRE5 1749 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 IGKV6D-41A0A0C4DH26 115 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 CD4P01730 458 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 SKIP12755 728 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 RBP5P82980 135 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 RNASELQ05823 741 aaKnown RBP12.63□□□□□ -0.39
RBM39-223ENST00000463004 SNRNP35Q16560 246 aaKnown RBP12.63□□□□□ -0.39
RBM39-223ENST00000463004 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 TWF2Q6IBS0 349 aaKnown RBP12.63□□□□□ -0.39
RBM39-223ENST00000463004 ANKRD13CQ8N6S4 541 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 KCNMB3Q9NPA1 279 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 NFASCO94856 1347 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 ARP10275 920 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 TTI2Q6NXR4 508 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 RFFLQ8WZ73 363 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 NFIBO00712 420 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 EPHB4P54760 987 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 RASGRP2Q7LDG7 609 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 HEXIM2Q96MH2 286 aaKnown RBP12.63□□□□□ -0.39
RBM39-223ENST00000463004 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
RBM39-223ENST00000463004 ATF2P15336 505 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 CDKAL1Q5VV42 579 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 OTOP1Q7RTM1 612 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 MAGOHBQ96A72 148 aaKnown RBP12.62□□□□□ -0.39
RBM39-223ENST00000463004 AGPAT3Q9NRZ7 376 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 SLC38A7Q9NVC3 462 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 PLCH1Q4KWH8 1693 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
RBM39-223ENST00000463004 CCDC144BQ3MJ40 725 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 PSMB7Q99436 277 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 DYNC1LI2O43237 492 aaPredicted RBP12.62□□□□□ -0.39
RBM39-223ENST00000463004 MYBP10242 640 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 TCF7P36402 384 aaPredicted RBP12.62□□□□□ -0.39
RBM39-223ENST00000463004 SLC1A1P43005 524 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 TNIP3Q96KP6 325 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 PRKAG2Q9UGJ0 569 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 GOLGA8KD6RF30 607 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 PODXLO00592 558 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 CLTAP09496 248 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 RARBP10826 455 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 ARL4AP40617 200 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 CUL1Q13616 776 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 TFDP2Q14188 446 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 WNT8AQ9H1J5 351 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 CNOT8Q9UFF9 292 aaKnown RBP12.62□□□□□ -0.39
RBM39-223ENST00000463004 TRAF3IP3Q9Y228 551 aa12.62□□□□□ -0.39
RBM39-223ENST00000463004 TLDC2A0PJX2 215 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 RTN2O75298 545 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 STAMBPO95630 424 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 UCHL3P15374 230 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 CYP27A1Q02318 531 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 NFX1Q12986 1120 aaKnown RBP12.61□□□□□ -0.39
RBM39-223ENST00000463004 SCYL2Q6P3W7 929 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 BBS5Q8N3I7 341 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 FOXP2O15409 715 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 MOCS3O95396 460 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 VSIG10LQ86VR7 867 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 WHAMMQ8TF30 809 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ASCC2Q9H1I8 757 aaPredicted RBP12.61□□□□□ -0.39
RBM39-223ENST00000463004 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 UBIAD1Q9Y5Z9 338 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 C5P01031 1676 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 NPHP3-ACAD11A0A0J9YXS1 232 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ADCY8P40145 1251 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 GABPB1Q06547 395 aaPredicted RBP12.61□□□□□ -0.39
RBM39-223ENST00000463004 E2F4Q16254 413 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 TRAPPC11Q7Z392 1133 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ZNF507Q8TCN5 953 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ATP8B4Q8TF62 1192 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.391e-8■■■■□ 25.8
RBM39-223ENST00000463004 AGPAT1Q99943 283 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 IP6K2Q9UHH9 426 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 COMMD10Q9Y6G5 202 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 PRPSAP2O60256 369 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ECEL1O95672 775 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ALDH5A1P51649 535 aaPredicted RBP12.61□□□□□ -0.39
RBM39-223ENST00000463004 OSTNP61366 133 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ATF7IP2Q5U623 682 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ZNF720Q7Z2F6 126 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 RPUSD2Q8IZ73 545 aaKnown RBP12.61□□□□□ -0.39
RBM39-223ENST00000463004 OR6B3Q8NGW1 331 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ABHD16BQ9H3Z7 469 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 ZNF148Q9UQR1 794 aa12.61□□□□□ -0.39
RBM39-223ENST00000463004 YDJCA8MPS7 323 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 PNPLA4P41247 253 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms