RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
HPS1-206ENST00000462743 ATP6V1DQ9Y5K8 247 aa13.35□□□□□ -0.27
HPS1-206ENST00000462743 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 H3BNC9 293 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
HPS1-206ENST00000462743 SCP2P22307 547 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 TXLNAP40222 546 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 NPTX2P47972 431 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 ZNF131P52739 623 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 DNM1Q05193 864 aaKnown RBP13.34□□□□□ -0.27
HPS1-206ENST00000462743 MCM6Q14566 821 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 MAPK6Q16659 721 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 DEPTORQ8TB45 409 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 POLD4Q9HCU8 107 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 ARHGAP28Q9P2N2 729 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 PCDHA7Q9UN72 937 aa13.34□□□□□ -0.27
HPS1-206ENST00000462743 K7ERI5 159 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 INPPL1O15357 1258 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
HPS1-206ENST00000462743 FGFR1P11362 822 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 PLS3P13797 630 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 GATMP50440 423 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 SMTNP53814 917 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 PEX3P56589 373 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 NUCB2P80303 420 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 DMP1Q13316 513 aaPredicted RBP13.33□□□□□ -0.28
HPS1-206ENST00000462743 GIT2Q14161 759 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 SMG8Q8ND04 991 aaKnown RBP13.33□□□□□ -0.28
HPS1-206ENST00000462743 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 CERS4Q9HA82 394 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 UBN1Q9NPG3 1134 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 KMT5AQ9NQR1 393 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.28
HPS1-206ENST00000462743 MTCH2Q9Y6C9 303 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 MRPL42Q9Y6G3 142 aaKnown RBP13.33□□□□□ -0.28
HPS1-206ENST00000462743 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 CHD9Q3L8U1 2897 aa13.33□□□□□ -0.28
HPS1-206ENST00000462743 LAMA2P24043 3122 aaKnown RBP13.33□□□□□ -0.28
HPS1-206ENST00000462743 CARNS1A5YM72 827 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 SFI1A8K8P3 1242 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 H0YCG3 227 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 RFXAPO00287 272 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 OFD1O75665 1012 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 PRKCBP05771 671 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 FOSL2P15408 326 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 E2F4Q16254 413 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 CSPP1Q1MSJ5 1256 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 SLC27A1Q6PCB7 646 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 SHC4Q6S5L8 630 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 AGMOQ6ZNB7 445 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 LRRC55Q6ZSA7 311 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 SV2BQ7L1I2 683 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 GPBP1Q86WP2 473 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 LMAN2LQ9H0V9 348 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 CUEDC2Q9H467 287 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 CWH43Q9H720 699 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
HPS1-206ENST00000462743 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
HPS1-206ENST00000462743 A0A087X0B3 334 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 NPHP3-ACAD11A0A0J9YXS1 232 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 CCDC169A6NNP5 214 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 N4BP3O15049 544 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 B4GALT5O43286 388 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 MAPTP10636 758 aaKnown RBP13.31□□□□□ -0.28
HPS1-206ENST00000462743 KRT85P78386 507 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 GPM6BQ13491 265 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
HPS1-206ENST00000462743 NT5DC1Q5TFE4 455 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 RESP18Q5W5W9 173 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 TAS1R3Q7RTX0 852 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 ABI1Q8IZP0 508 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 DNAJC19Q96DA6 116 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 REEP2Q9BRK0 252 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 C11orf84Q9BUA3 381 aaPredicted RBP13.31□□□□□ -0.28
HPS1-206ENST00000462743 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
HPS1-206ENST00000462743 MRPL9Q9BYD2 267 aaKnown RBP13.31□□□□□ -0.28
HPS1-206ENST00000462743 ST6GALNAC4Q9H4F1 302 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 PARVGQ9HBI0 331 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 KBTBD4Q9NVX7 518 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 KANSL3Q9P2N6 904 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 TNFSF13BQ9Y275 285 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 GIT1Q9Y2X7 761 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 IPPQ9Y573 584 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
HPS1-206ENST00000462743 KIAA1671Q9BY89 1806 aa13.3□□□□□ -0.28
HPS1-206ENST00000462743 MYMKA6NI61 221 aa13.3□□□□□ -0.28
HPS1-206ENST00000462743 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
HPS1-206ENST00000462743 MEIS3P2A8K0S8 358 aa13.3□□□□□ -0.28
HPS1-206ENST00000462743 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
HPS1-206ENST00000462743 EDN1P05305 212 aa13.3□□□□□ -0.28
HPS1-206ENST00000462743 ITGA4P13612 1032 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms