RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 RPTORQ8N122 1335 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 FAM86B1E9PN63 330 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 F8W031 263 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 G3V3G9 751 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 K7ENM7 598 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 O00370 1275 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MEIS2O14770 477 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PPEF1O14829 653 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PPIP5K2O43314 1243 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RIPK2O43353 540 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MGRN1O60291 552 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 GAS7O60861 476 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RTN2O75298 545 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MTA2O94776 668 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 LUC7L3O95232 432 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 OAS1P00973 400 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 FTLP02792 175 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CYP3A4P08684 503 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 FAM86B2P0C5J1 330 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 BMP3P12645 472 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RARGP13631 454 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 EEF2P13639 858 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ATF2P15336 505 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 NQO1P15559 274 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 FGFR4P22455 802 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CALRP27797 417 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 NMT1P30419 496 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 COPB2P35606 906 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 COILP38432 576 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PTGIRP43119 386 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RPL21P46778 160 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 IFNAR2P48551 515 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MMP14P50281 582 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PRELPP51888 382 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MFAP3P55082 362 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 KCNQ4P56696 695 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RWDD2BP57060 319 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MAP2K1Q02750 393 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CAV1Q03135 178 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PPARDQ03181 441 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 LMNB2Q03252 620 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 BFSP1Q12934 665 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RIPK1Q13546 671 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 SLC29A2Q14542 456 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MESDQ14696 234 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CRYMQ14894 314 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 E2F5Q15329 346 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CNGA2Q16280 664 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CYP1B1Q16678 543 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ARHGAP44Q17R89 818 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 FAM98CQ17RN3 349 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 USH1GQ495M9 461 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CRY2Q49AN0 593 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CERKLQ49MI3 558 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CBWD6Q4V339 395 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 FAM133BQ5BKY9 247 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CBWD3Q5JTY5 395 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CBWD5Q5RIA9 395 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ODR4Q5SWX8 454 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PRR5LQ6MZQ0 368 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RINT1Q6NUQ1 792 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 HIBCHQ6NVY1 386 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CDC42EP5Q6NZY7 148 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TTC27Q6P3X3 843 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC137Q6PK04 289 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CRELD2Q6UXH1 353 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RNF207Q6ZRF8 634 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TMEM179Q6ZVK1 233 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 C1orf186Q6ZWK4 172 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 INTS8Q75QN2 995 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 SPATA21Q7Z572 469 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PIGWQ7Z7B1 504 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PNMA8AQ86V59 439 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC25Q86WR0 208 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 SLC13A5Q86YT5 568 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 SLC9A9Q8IVB4 645 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TPH2Q8IWU9 490 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RPUSD2Q8IZ73 545 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 PRELID2Q8N945 189 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 C12orf50Q8NA57 414 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 BBOF1Q8ND07 529 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 OLIG1Q8TAK6 271 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 UHMK1Q8TAS1 419 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 EPS8L3Q8TE67 593 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TCP11Q8WWU5 503 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CRYGNQ8WXF5 182 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ALG3Q92685 438 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 KIFAP3Q92845 792 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 GLG1Q92896 1179 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 MKL1Q969V6 931 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 LENG9Q96B70 501 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 C18orf8Q96DM3 657 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TRIM11Q96F44 468 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 DYDC2Q96IM9 177 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 SERPINB12Q96P63 405 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 RAB3IPQ96QF0 476 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ACCSQ96QU6 501 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 NACC1Q96RE7 527 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CRAMP1Q96RY5 1269 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms