RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 PPM1JQ5JR12 505 aa17.22■□□□□ 0.35
APP-211ENST00000462267 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
APP-211ENST00000462267 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
APP-211ENST00000462267 RSPO2Q6UXX9 243 aaPredicted RBP17.22■□□□□ 0.35
APP-211ENST00000462267 TMTC3Q6ZXV5 915 aa17.22■□□□□ 0.35
APP-211ENST00000462267 GET4Q7L5D6 327 aaPredicted RBP17.22■□□□□ 0.35
APP-211ENST00000462267 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
APP-211ENST00000462267 NETO1Q8TDF5 533 aa17.22■□□□□ 0.35
APP-211ENST00000462267 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
APP-211ENST00000462267 ZNF577Q9BSK1 485 aa17.22■□□□□ 0.35
APP-211ENST00000462267 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
APP-211ENST00000462267 INO80BQ9C086 356 aaPredicted RBP17.22■□□□□ 0.35
APP-211ENST00000462267 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
APP-211ENST00000462267 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
APP-211ENST00000462267 PIN4Q9Y237 131 aaKnown RBP17.22■□□□□ 0.35
APP-211ENST00000462267 FAM208BQ5VWN6 2430 aa17.22■□□□□ 0.35
APP-211ENST00000462267 FAM170BA6NMN3 283 aa17.21■□□□□ 0.35
APP-211ENST00000462267 NRP1O14786 923 aa17.21■□□□□ 0.35
APP-211ENST00000462267 OATP04181 439 aa17.21■□□□□ 0.35
APP-211ENST00000462267 RXRAP19793 462 aa17.21■□□□□ 0.35
APP-211ENST00000462267 UBXN2BQ14CS0 331 aa17.21■□□□□ 0.35
APP-211ENST00000462267 MLF2Q15773 248 aaPredicted RBP17.21■□□□□ 0.35
APP-211ENST00000462267 FAM126AQ9BYI3 521 aaPredicted RBP17.21■□□□□ 0.35
APP-211ENST00000462267 PRKD2Q9BZL6 878 aa17.21■□□□□ 0.35
APP-211ENST00000462267 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
APP-211ENST00000462267 SH2B2O14492 632 aaPredicted RBP17.2■□□□□ 0.34
APP-211ENST00000462267 SLC30A4O14863 429 aa17.2■□□□□ 0.34
APP-211ENST00000462267 PRC1O43663 620 aa17.2■□□□□ 0.34
APP-211ENST00000462267 CYP3A4P08684 503 aa17.2■□□□□ 0.34
APP-211ENST00000462267 MYBP10242 640 aa17.2■□□□□ 0.34
APP-211ENST00000462267 LIFRP42702 1097 aa17.2■□□□□ 0.34
APP-211ENST00000462267 GLUD2P49448 558 aa17.2■□□□□ 0.34
APP-211ENST00000462267 CLK2P49760 499 aaKnown RBP17.2■□□□□ 0.34
APP-211ENST00000462267 SETQ01105 290 aaPredicted RBP17.2■□□□□ 0.34
APP-211ENST00000462267 SLC44A4Q53GD3 710 aa17.2■□□□□ 0.34
APP-211ENST00000462267 ZBTB41Q5SVQ8 909 aa17.2■□□□□ 0.34
APP-211ENST00000462267 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
APP-211ENST00000462267 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
APP-211ENST00000462267 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
APP-211ENST00000462267 TMEM87BQ96K49 555 aa17.2■□□□□ 0.34
APP-211ENST00000462267 NELL2Q99435 816 aa17.2■□□□□ 0.34
APP-211ENST00000462267 RPP25Q9BUL9 199 aaKnown RBP17.2■□□□□ 0.34
APP-211ENST00000462267 PARD6AQ9NPB6 346 aa17.2■□□□□ 0.34
APP-211ENST00000462267 MTF2Q9Y483 593 aaPredicted RBP17.2■□□□□ 0.34
APP-211ENST00000462267 SAMM50Q9Y512 469 aa17.2■□□□□ 0.34
APP-211ENST00000462267 SMCO2A6NFE2 343 aa17.19■□□□□ 0.34
APP-211ENST00000462267 WDR64B1ANS9 1081 aa17.19■□□□□ 0.34
APP-211ENST00000462267 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
APP-211ENST00000462267 ZNF862O60290 1169 aa17.19■□□□□ 0.34
APP-211ENST00000462267 SPATA31D3P0C874 917 aa17.19■□□□□ 0.34
APP-211ENST00000462267 PFKPQ01813 784 aa17.19■□□□□ 0.34
APP-211ENST00000462267 NUCB1Q02818 461 aa17.19■□□□□ 0.34
APP-211ENST00000462267 AGMOQ6ZNB7 445 aa17.19■□□□□ 0.34
APP-211ENST00000462267 SPATA31D4Q6ZUB0 917 aa17.19■□□□□ 0.34
APP-211ENST00000462267 RNF168Q8IYW5 571 aaPredicted RBP17.19■□□□□ 0.34
APP-211ENST00000462267 CRYGNQ8WXF5 182 aa17.19■□□□□ 0.34
APP-211ENST00000462267 FGF14Q92915 247 aa17.19■□□□□ 0.34
APP-211ENST00000462267 CLDN23Q96B33 292 aa17.19■□□□□ 0.34
APP-211ENST00000462267 LTB4R2Q9NPC1 389 aa17.19■□□□□ 0.34
APP-211ENST00000462267 PCDHB2Q9Y5E7 798 aa17.19■□□□□ 0.34
APP-211ENST00000462267 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
APP-211ENST00000462267 CNTNAP2Q9UHC6 1331 aa17.19■□□□□ 0.34
APP-211ENST00000462267 A0A087WZ62 844 aa17.18■□□□□ 0.34
APP-211ENST00000462267 hCG_1984214I3L0E3 225 aa17.18■□□□□ 0.34
APP-211ENST00000462267 NCAM2O15394 837 aa17.18■□□□□ 0.34
APP-211ENST00000462267 EFEMP2O95967 443 aa17.18■□□□□ 0.34
APP-211ENST00000462267 FSHRP23945 695 aa17.18■□□□□ 0.34
APP-211ENST00000462267 MCM5P33992 734 aa17.18■□□□□ 0.34
APP-211ENST00000462267 DNM2P50570 870 aa17.18■□□□□ 0.34
APP-211ENST00000462267 PRKCEQ02156 737 aa17.18■□□□□ 0.34
APP-211ENST00000462267 DSG1Q02413 1049 aa17.18■□□□□ 0.34
APP-211ENST00000462267 DMWDQ09019 674 aa17.18■□□□□ 0.34
APP-211ENST00000462267 DRP2Q13474 957 aa17.18■□□□□ 0.34
APP-211ENST00000462267 PARM1Q6UWI2 310 aa17.18■□□□□ 0.34
APP-211ENST00000462267 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
APP-211ENST00000462267 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
APP-211ENST00000462267 CATSPER4Q7RTX7 472 aa17.18■□□□□ 0.34
APP-211ENST00000462267 MRPL10Q7Z7H8 261 aaKnown RBP17.18■□□□□ 0.34
APP-211ENST00000462267 ZNF410Q86VK4 478 aa17.18■□□□□ 0.34
APP-211ENST00000462267 ZNF713Q8N859 430 aaPredicted RBP17.18■□□□□ 0.34
APP-211ENST00000462267 ST13P5Q8NFI4 369 aaPredicted RBP17.18■□□□□ 0.34
APP-211ENST00000462267 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
APP-211ENST00000462267 RSAD1Q9HA92 442 aa17.18■□□□□ 0.34
APP-211ENST00000462267 PRMT8Q9NR22 394 aaPredicted RBP17.18■□□□□ 0.34
APP-211ENST00000462267 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
APP-211ENST00000462267 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
APP-211ENST00000462267 RAB23Q9ULC3 237 aa17.18■□□□□ 0.34
APP-211ENST00000462267 PATJQ8NI35 1801 aa17.18■□□□□ 0.34
APP-211ENST00000462267 TGM5O43548 720 aa17.17■□□□□ 0.34
APP-211ENST00000462267 LRP3O75074 770 aa17.17■□□□□ 0.34
APP-211ENST00000462267 RPS9P46781 194 aaKnown RBP17.17■□□□□ 0.34
APP-211ENST00000462267 AFF1P51825 1210 aaKnown RBP17.17■□□□□ 0.34
APP-211ENST00000462267 SPEM2Q0P670 501 aa17.17■□□□□ 0.34
APP-211ENST00000462267 COL9A2Q14055 689 aaPredicted RBP17.17■□□□□ 0.34
APP-211ENST00000462267 TARBP2Q15633 366 aaKnown RBP17.17■□□□□ 0.34
APP-211ENST00000462267 LAIR1Q6GTX8 287 aa17.17■□□□□ 0.34
APP-211ENST00000462267 PALB2Q86YC2 1186 aa17.17■□□□□ 0.34
APP-211ENST00000462267 GPR65Q8IYL9 337 aa17.17■□□□□ 0.34
APP-211ENST00000462267 DISC1Q9NRI5 854 aa17.17■□□□□ 0.34
APP-211ENST00000462267 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms