RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 KINO60870 393 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 F2P00734 622 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 ICAM1P05362 532 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 CTSHP09668 335 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 ZNF286BP0CG31 522 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SNHG28P0DPA3 235 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 RXRAP19793 462 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 EDNRBP24530 442 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 KIF5BP33176 963 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SLC16A2P36021 539 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 LMNB2Q03252 620 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 RAD51AP2Q09MP3 1159 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 TROAPQ12815 778 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 GRM4Q14833 912 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SKOR2Q2VWA4 1001 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 GPATCH4Q5T3I0 446 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SYDE2Q5VT97 1194 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 TTBK2Q6IQ55 1244 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 CES5AQ6NT32 575 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 LLGL2Q6P1M3 1020 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SLC30A10Q6XR72 485 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 RNF207Q6ZRF8 634 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SGMS1Q86VZ5 419 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 MICU3Q86XE3 530 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 DNERQ8NFT8 737 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 BRF1Q92994 677 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 NECTIN4Q96NY8 510 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 SLKQ9H2G2 1235 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 KIAA1217Q5T5P2 1943 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 KAT6AQ92794 2004 aa6.77□□□□□ -1.33
SMARCC1-204ENST00000462198 FRYQ5TBA9 3013 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 MAST4O15021 2626 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 C17orf102A2RUQ5 167 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 GOLGA8BA8MQT2 603 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 KLRF2D3W0D1 207 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 PPFIA4O75335 1185 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 FAM13AO94988 1023 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 ZIC2O95409 532 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 PROS1P07225 676 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 TGM1P22735 817 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 GNAQP50148 359 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 RPS6P62753 249 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 UBE3AQ05086 875 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 ITIH3Q06033 890 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 TBC1D8BQ0IIM8 1120 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 USP4Q13107 963 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 TDGQ13569 410 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 RABEP1Q15276 862 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 ANKRD1Q15327 319 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 RTN1Q16799 776 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 PAN2Q504Q3 1202 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 FAM26DQ5JW98 314 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 SPECC1Q5M775 1068 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 APOA5Q6Q788 366 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 BTNL9Q6UXG8 535 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 C1orf210Q8IVY1 113 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 CMTR2Q8IYT2 770 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 STAG2Q8N3U4 1231 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 FBXL16Q8N461 479 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 FANCBQ8NB91 859 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 CLEC4DQ8WXI8 215 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 BORCS6Q96GS4 357 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 MAP3K14Q99558 947 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 LZTS2Q9BRK4 669 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 ADAM7Q9H2U9 754 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 CPVLQ9H3G5 476 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 VAT1LQ9HCJ6 419 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 DDX41Q9UJV9 622 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 USP18Q9UMW8 372 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 ASPMQ8IZT6 3477 aa6.76□□□□□ -1.33
SMARCC1-204ENST00000462198 CCDC196A0A1B0GTZ2 297 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 J3QL48 77 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 CAND2O75155 1236 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 CHRNA1P02708 482 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 DCNP07585 359 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 WEE2P0C1S8 567 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 MTHFRP42898 656 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 METAP2P50579 478 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 RCAN1P53805 252 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 AK2P54819 239 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 TOB2Q14106 344 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 DSC3Q14574 896 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 CDC37Q16543 378 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 ATAT1Q5SQI0 421 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 LRSAM1Q6UWE0 723 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 RTN4RL1Q86UN2 441 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 GAS2L3Q86XJ1 694 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 ADGRF4Q8IZF3 695 aa6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 TDRD5Q8NAT2 981 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-204ENST00000462198 PPTC7Q8NI37 304 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms