RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 PCDH18Q9HCL0 1135 aa6.37□□□□□ -1.39
CLK1-207ENST00000461981 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.37□□□□□ -1.39
CLK1-207ENST00000461981 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.37□□□□□ -1.39
CLK1-207ENST00000461981 TNRC18O15417 2968 aaPredicted RBP6.37□□□□□ -1.39
CLK1-207ENST00000461981 PNMA6EA0A0J9YXQ4 647 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 A8MUI8 341 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TIMM44O43615 452 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 FGBP02675 491 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 DNAJB2P25686 324 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 CPT1AP50416 773 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 PDE1AP54750 535 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TUBB4BP68371 445 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SEPT2Q15019 361 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 LMBRD2Q68DH5 695 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 THOC7Q6I9Y2 204 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 MAATS1Q7Z4T9 603 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 ADGRA1Q86SQ6 560 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 LMNTD2Q8IXW0 634 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 GBP7Q8N8V2 638 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 RHPN1Q8TCX5 695 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 APPBP2Q92624 585 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 JAKMIP2Q96AA8 810 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 POLR3CQ9BUI4 534 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 SNX14Q9Y5W7 946 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SURF6O75683 361 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 DNAJC8O75937 253 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 ATP2A2P16615 1042 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 SP100P23497 879 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 EDNRBP24530 442 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SARSP49591 514 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 ST3GAL1Q11201 340 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 LONRF3Q496Y0 759 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 ALS2CLQ60I27 953 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 ANKS1AQ92625 1134 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 HPS3Q969F9 1004 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 EAF2Q96CJ1 260 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 FAM122AQ96E09 287 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SPATA17Q96L03 361 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 CEP295NLQ96MC4 621 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 NAPGQ99747 312 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 MTG1Q9BT17 334 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 TCHPQ9BT92 498 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 NOC4LQ9BVI4 516 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 AP5M1Q9H0R1 490 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TMCO1Q9UM00 188 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 EFR3BQ9Y2G0 817 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 A6NNZ2 444 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 PI4K2BG5E9Z4 385 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 ENC1O14682 589 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 GDF11O95390 407 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SNAI1O95863 264 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 NR1D1P20393 614 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 MCM3P25205 808 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 GSTT1P30711 240 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TUFMP49411 452 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 MRPS35P82673 323 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 KLC1Q07866 573 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 ITGA7Q13683 1181 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 FXNQ16595 210 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TUBB8Q3ZCM7 444 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 LEXMQ3ZCV2 418 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 CAPN12Q6ZSI9 719 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 VSTM4Q8IW00 320 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 CACNA2D3Q8IZS8 1091 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TEX9Q8N6V9 391 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SP7Q8TDD2 431 aaPredicted RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 ACER1Q8TDN7 264 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 INIPQ9NRY2 104 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 PAG1Q9NWQ8 432 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 ARHGEF38Q9NXL2 777 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 R3HDM2Q9Y2K5 976 aaKnown RBP6.36□□□□□ -1.39
CLK1-207ENST00000461981 SQORQ9Y6N5 450 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 SRCAPQ6ZRS2 3230 aa6.36□□□□□ -1.39
CLK1-207ENST00000461981 TMEM247A6NEH6 219 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 STX10O60499 249 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 HSF2BPO75031 334 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 SRGAP2O75044 1071 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 STAM2O75886 525 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 FLOT1O75955 427 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 TTLL1O95922 423 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 SPATA31D3P0C874 917 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 HARSP12081 509 aaKnown RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 CCNFP41002 786 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 FAM133BQ5BKY9 247 aaKnown RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 FOXB2Q5VYV0 432 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 PACS1Q6VY07 963 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 SPATA31D4Q6ZUB0 917 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 ZNF365Q70YC5 407 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 BMP8AQ7Z5Y6 402 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 TSEN2Q8NCE0 465 aaKnown RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 ATG4CQ96DT6 458 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 SEC16BQ96JE7 1060 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 MMS19Q96T76 1030 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLK1-207ENST00000461981 KATNAL1Q9BW62 490 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 NACAP1Q9BZK3 213 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 NDST4Q9H3R1 872 aa6.35□□□□□ -1.39
CLK1-207ENST00000461981 DMAP1Q9NPF5 467 aaPredicted RBP6.35□□□□□ -1.39
CLK1-207ENST00000461981 STK38LQ9Y2H1 464 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms