RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 TDP2O95551 362 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 PSAPP07602 524 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 LIG1P18858 919 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 CLCN3P51790 818 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 NLRP11P59045 1033 aaKnown RBP17.26■□□□□ 0.35
SF3A3-203ENST00000461869 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
SF3A3-203ENST00000461869 C4orf32Q8N8J7 132 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 RNF169Q8NCN4 708 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 CASP10Q92851 521 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 ATOH1Q92858 354 aaPredicted RBP17.26■□□□□ 0.35
SF3A3-203ENST00000461869 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 AK8Q96MA6 479 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 RIPOR3Q96MK2 946 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 MBOAT7Q96N66 472 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 SPG21Q9NZD8 308 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 GABBR1Q9UBS5 961 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 TCEAL9Q9UHQ7 104 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 PCDHA10Q9Y5I2 948 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 KMT2EQ8IZD2 1858 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 TBX3O15119 743 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 PDGFBP01127 241 aaPredicted RBP17.25■□□□□ 0.35
SF3A3-203ENST00000461869 PFKFB1P16118 471 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 TMOD1P28289 359 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
SF3A3-203ENST00000461869 Q4G0T1 1027 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 CES5AQ6NT32 575 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 SHC4Q6S5L8 630 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 SNX27Q96L92 541 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 CLIC6Q96NY7 704 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 MAP7D2Q96T17 732 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 ADAMTS10Q9H324 1103 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 GOLPH3LQ9H4A5 285 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 TMEM63CQ9P1W3 806 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 HPSEQ9Y251 543 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 SAMM50Q9Y512 469 aa17.25■□□□□ 0.35
SF3A3-203ENST00000461869 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 MARCH6O60337 910 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 NR1I2O75469 434 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 EIF4BP23588 611 aaKnown RBP17.24■□□□□ 0.35
SF3A3-203ENST00000461869 SYKP43405 635 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 NDUFA8P51970 172 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
SF3A3-203ENST00000461869 SLFN12Q8IYM2 578 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
SF3A3-203ENST00000461869 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 LRRC71Q8N4P6 559 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 MRPL43Q8N983 215 aaKnown RBP17.24■□□□□ 0.35
SF3A3-203ENST00000461869 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 FAM167AQ96KS9 214 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 TMEM60Q9H2L4 133 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 ADAM7Q9H2U9 754 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 HCFC2Q9Y5Z7 792 aa17.24■□□□□ 0.35
SF3A3-203ENST00000461869 EVPLQ92817 2033 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 H0Y858 1186 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 SLC37A4O43826 429 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 CA8P35219 290 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 FXR2P51116 673 aaKnown RBP eCLIP17.23■□□□□ 0.35
SF3A3-203ENST00000461869 NUBP1P53384 320 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 ITIH3Q06033 890 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 PRR16Q569H4 304 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 CLLU1OSQ5K130 101 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 UBALD2Q8IYN6 164 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 SLC39A11Q8N1S5 342 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 LINC01465Q8N7H1 131 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 ZNF668Q96K58 619 aaPredicted RBP17.23■□□□□ 0.35
SF3A3-203ENST00000461869 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 NECTIN4Q96NY8 510 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 MTMR9Q96QG7 549 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 GZF1Q9H116 711 aaPredicted RBP17.23■□□□□ 0.35
SF3A3-203ENST00000461869 POMKQ9H5K3 350 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 KCNH3Q9ULD8 1083 aa17.23■□□□□ 0.35
SF3A3-203ENST00000461869 C2CD4DB7Z1M9 353 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 EDIL3O43854 480 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
SF3A3-203ENST00000461869 EOMESO95936 686 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 SNW1Q13573 536 aaKnown RBP17.22■□□□□ 0.35
SF3A3-203ENST00000461869 MTMR3Q13615 1198 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 BMS1Q14692 1282 aaKnown RBP17.22■□□□□ 0.35
SF3A3-203ENST00000461869 HELQQ8TDG4 1101 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 FAM20AQ96MK3 541 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 SCLT1Q96NL6 688 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 NRBP2Q9NSY0 501 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 USP25Q9UHP3 1055 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 HOOK1Q9UJC3 728 aaKnown RBP17.22■□□□□ 0.35
SF3A3-203ENST00000461869 SORCS3Q9UPU3 1222 aa17.22■□□□□ 0.35
SF3A3-203ENST00000461869 TRIOO75962 3097 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms