RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 TMEM169Q96HH4 297 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 MFSD14AQ96MC6 490 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 LXNQ9BS40 222 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 APOL5Q9BWW9 433 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 NRDE2Q9H7Z3 1164 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 AGPAT5Q9NUQ2 364 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 FAM105AQ9NUU6 356 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 TBC1D13Q9NVG8 400 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 ORC3Q9UBD5 711 aaPredicted RBP9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 PPME1Q9Y570 386 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 HCFC2Q9Y5Z7 792 aa9.83□□□□□ -0.84
SOX2-OT-202ENST00000461063 TMEM221A6NGB7 291 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 M0R296 226 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 ZBTB39O15060 712 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 MARCH6O60337 910 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 B4GALT3O60512 393 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 CLASP2O75122 1294 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 CXCL14O95715 111 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 GALTP07902 379 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 SRGAP2CP0DJJ0 459 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 HOXA11P31270 313 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 MMRN1Q13201 1228 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 TPRNQ4KMQ1 711 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 UBXN11Q5T124 520 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 OTUD6AQ7L8S5 288 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 BMP8AQ7Z5Y6 402 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 SRGAP1Q7Z6B7 1085 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 MRPL10Q7Z7H8 261 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 ZNF280BQ86YH2 543 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 SLFN12Q8IYM2 578 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 VPS52Q8N1B4 723 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 NECAB1Q8N987 351 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 PSPC1Q8WXF1 523 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 AUTS2Q8WXX7 1259 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 WASF1Q92558 559 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 CASP10Q92851 521 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 TNFRSF25Q93038 417 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 PGBD4Q96DM1 585 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 IGSF21Q96ID5 467 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 DYDC2Q96IM9 177 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 FBXL18Q96ME1 805 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 ZBP1Q9H171 429 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 KCNH6Q9H252 994 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 ZSWIM4Q9H7M6 989 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 DNAJB4Q9UDY4 337 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 CDH22Q9UJ99 828 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 INPP5FQ9Y2H2 1132 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 PCDHB2Q9Y5E7 798 aa9.82□□□□□ -0.84
SOX2-OT-202ENST00000461063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 GAS2O43903 313 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 SLITRK3O94933 977 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 LARGE1O95461 756 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 NEFLP07196 543 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 CA8P35219 290 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 KRT2P35908 639 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 SLC11A1P49279 550 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 AFF1P51825 1210 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 NHLH1Q02575 133 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 CYP4A11Q02928 519 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 RNASELQ05823 741 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 CTTNQ14247 550 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 EMC2Q15006 297 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 ME3Q16798 604 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 XKR9Q5GH70 373 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 AGMOQ6ZNB7 445 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 DDX53Q86TM3 631 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 FERMT3Q86UX7 667 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 TPH2Q8IWU9 490 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 TCP11Q8WWU5 503 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 GTF3C6Q969F1 213 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 HSD17B14Q9BPX1 270 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 EIF2AK1Q9BQI3 630 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 VN1R3Q9BXE9 311 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 GBP3Q9H0R5 595 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 ADAM7Q9H2U9 754 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 IRAK3Q9Y616 596 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 WDR81Q562E7 1941 aa9.81□□□□□ -0.84
SOX2-OT-202ENST00000461063 WNT7AO00755 349 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 ASAP2O43150 1006 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 DDHD2O94830 711 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 LYPLA2O95372 231 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 CTSAP10619 480 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 SP100P23497 879 aaPredicted RBP9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 ITIH3Q06033 890 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 SIGLEC14Q08ET2 396 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 BMS1Q14692 1282 aaKnown RBP9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 CALCRLQ16602 461 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 PTPN21Q16825 1174 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 CES5AQ6NT32 575 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 RNF149Q8NC42 400 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 NSUN7Q8NE18 718 aaKnown RBP9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 URGCPQ8TCY9 931 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 SLC22A17Q8WUG5 538 aa9.8□□□□□ -0.84
SOX2-OT-202ENST00000461063 PBXIP1Q96AQ6 731 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms