RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 STAG3L1P0CL83 205 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 PLS3P13797 630 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 FGFR4P22455 802 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 NPTX2P47972 431 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 ZNF131P52739 623 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 DHX8Q14562 1220 aaKnown RBP12.21□□□□□ -0.45
APTX-209ENST00000460940 FAM187BQ17R55 369 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 LRSAM1Q6UWE0 723 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 PARVGQ9HBI0 331 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 LMBRD1Q9NUN5 540 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 LARSQ9P2J5 1176 aaKnown RBP12.21□□□□□ -0.45
APTX-209ENST00000460940 USP25Q9UHP3 1055 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 KCNH3Q9ULD8 1083 aa12.21□□□□□ -0.45
APTX-209ENST00000460940 C9IYK1 514 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 TSPAN1O60635 241 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 CSDE1O75534 798 aaKnown RBP12.21□□□□□ -0.46
APTX-209ENST00000460940 FAM13AO94988 1023 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 SKIP12755 728 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 ABCD1P33897 745 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 RAB27AP51159 221 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 SMTNP53814 917 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 PEX3P56589 373 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 CBX1P83916 185 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 RAD51AP2Q09MP3 1159 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 GIT2Q14161 759 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 MAPK6Q16659 721 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 NOTUMQ6P988 496 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 RTN4RL1Q86UN2 441 aaPredicted RBP12.21□□□□□ -0.46
APTX-209ENST00000460940 KCNN1Q92952 543 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 DHX58Q96C10 678 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 RAD9AQ99638 391 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 ARID3AQ99856 593 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 NTPCRQ9BSD7 190 aaKnown RBP12.21□□□□□ -0.46
APTX-209ENST00000460940 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 PBX4Q9BYU1 374 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 CCDC113Q9H0I3 377 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 FZD8Q9H461 694 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 ELAC1Q9H777 363 aaKnown RBP12.21□□□□□ -0.46
APTX-209ENST00000460940 KMT5AQ9NQR1 393 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 ARHGAP28Q9P2N2 729 aa12.21□□□□□ -0.46
APTX-209ENST00000460940 CNTNAP2Q9UHC6 1331 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 NPHP3-ACAD11A0A0J9YXS1 232 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 CCDC169A6NNP5 214 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 GRXCR1A8MXD5 290 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
APTX-209ENST00000460940 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
APTX-209ENST00000460940 TLL1O43897 1013 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 PFKFB1P16118 471 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 DNAJB2P25686 324 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 FXR1P51114 621 aaKnown RBP eCLIP12.2□□□□□ -0.46
APTX-209ENST00000460940 FAM189BP81408 668 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 HTRA4P83105 476 aaPredicted RBP12.2□□□□□ -0.46
APTX-209ENST00000460940 AMPD3Q01432 767 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 AMHR2Q16671 573 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
APTX-209ENST00000460940 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
APTX-209ENST00000460940 SLC17A8Q8NDX2 589 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 MRPS27Q92552 414 aaKnown RBP12.2□□□□□ -0.46
APTX-209ENST00000460940 DDX12PQ92771 950 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 GDPD2Q9HCC8 539 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 HPSEQ9Y251 543 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 INSL6Q9Y581 213 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 TTC3P53804 2025 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 ADGRA3Q8IWK6 1321 aa12.2□□□□□ -0.46
APTX-209ENST00000460940 A0A0U1RQF3 1178 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 PRKCBP05771 671 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 GAP43P17677 238 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 HOXA11P31270 313 aaPredicted RBP12.19□□□□□ -0.46
APTX-209ENST00000460940 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 CRIPAKQ8N1N5 446 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 TIFAQ96CG3 184 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 YME1L1Q96TA2 773 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 SEL1LQ9UBV2 794 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 LRFN2Q9ULH4 789 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 PTPRSQ13332 1948 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 MYMKA6NI61 221 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 ACKR2O00590 384 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 HOXA2O43364 376 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 SLFN14P0C7P3 912 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
APTX-209ENST00000460940 RABGGTBP53611 331 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 NCKAP1LP55160 1127 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
APTX-209ENST00000460940 GABPB1Q06547 395 aaPredicted RBP12.19□□□□□ -0.46
APTX-209ENST00000460940 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
APTX-209ENST00000460940 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 MYCT1Q8N699 235 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
APTX-209ENST00000460940 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
APTX-209ENST00000460940 TCHHQ07283 1943 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms