RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MTERF2Q49AM1 385 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 OLFML2BQ68BL8 750 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 PLA2G4FQ68DD2 849 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 IQSEC1Q6DN90 963 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 SLC39A5Q6ZMH5 540 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 ZNF720Q7Z2F6 126 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 ZC3H3Q8IXZ2 948 aaKnown RBP9.81□□□□□ -0.84
VPS50-207ENST00000458530 SYCP3Q8IZU3 236 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 PPTC7Q8NI37 304 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 SPIRE2Q8WWL2 714 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 TCP11Q8WWU5 503 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 TRIM43Q96BQ3 446 aaPredicted RBP9.81□□□□□ -0.84
VPS50-207ENST00000458530 GPR20Q99678 358 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 TUBGCP2Q9BSJ2 902 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 NOC4LQ9BVI4 516 aaKnown RBP9.81□□□□□ -0.84
VPS50-207ENST00000458530 NUP58Q9BVL2 599 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 GBP3Q9H0R5 595 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 KCTD10Q9H3F6 313 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 TAB2Q9NYJ8 693 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 ZNF215Q9UL58 517 aaPredicted RBP9.81□□□□□ -0.84
VPS50-207ENST00000458530 FAM184BQ9ULE4 1060 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 COL1A2P08123 1366 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 CHD9Q3L8U1 2897 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 GSTTP1A0A1W2PQM5 241 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 PRPF6O94906 941 aaKnown RBP9.8□□□□□ -0.84
VPS50-207ENST00000458530 ARIH2O95376 493 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 NR2F2P24468 414 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 ITGB8P26012 769 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 NCKAP1LP55160 1127 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 NPEPPSP55786 919 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 MARSP56192 900 aaKnown RBP9.8□□□□□ -0.84
VPS50-207ENST00000458530 UBXN1Q04323 297 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 ADAM9Q13443 819 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 ACVR2BQ13705 512 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 BRDTQ58F21 947 aaPredicted RBP9.8□□□□□ -0.84
VPS50-207ENST00000458530 MFSD14CQ5VZR4 134 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 LRRC55Q6ZSA7 311 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 APTXQ7Z2E3 356 aaKnown RBP9.8□□□□□ -0.84
VPS50-207ENST00000458530 FRMD5Q7Z6J6 570 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 CNGA4Q8IV77 575 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 RETREG2Q8NC44 543 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 ATP8B4Q8TF62 1192 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 BADQ92934 168 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 KCTD12Q96CX2 325 aaKnown RBP9.8□□□□□ -0.84
VPS50-207ENST00000458530 CCDC51Q96ER9 411 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 NAP1L5Q96NT1 182 aaPredicted RBP9.8□□□□□ -0.84
VPS50-207ENST00000458530 MKNK1Q9BUB5 465 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 VPS16Q9H269 839 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 KMT5AQ9NQR1 393 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 ERAP1Q9NZ08 941 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 RAPGEFL1Q9UHV5 662 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 NRBP1Q9UHY1 535 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 FRMD4BQ9Y2L6 1034 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS50-207ENST00000458530 EVPLQ92817 2033 aa9.8□□□□□ -0.84
VPS50-207ENST00000458530 CCDC169A6NNP5 214 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 CCP110O43303 1012 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 HBP1O60381 514 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 SORBS3O60504 671 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 STBD1O95210 358 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 NR3C1P04150 777 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 NMT1P30419 496 aaKnown RBP9.79□□□□□ -0.84
VPS50-207ENST00000458530 CASP5P51878 434 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 EPHB4P54760 987 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 PEX3P56589 373 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 GTF2BQ00403 316 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 ARHGAP1Q07960 439 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 TBC1D8BQ0IIM8 1120 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 GRIN2CQ14957 1233 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 TSR1Q2NL82 804 aaKnown RBP9.79□□□□□ -0.84
VPS50-207ENST00000458530 PROX2Q3B8N5 592 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 DUSP28Q4G0W2 176 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 VWA3BQ502W6 1294 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 TAPT1Q6NXT6 567 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 MAEAQ7L5Y9 396 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 HAUS6Q7Z4H7 955 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 IRF2BP1Q8IU81 584 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 SLC9A9Q8IVB4 645 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 LRRC8AQ8IWT6 810 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 C12orf56Q8IXR9 622 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 DAW1Q8N136 415 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 NPLOC4Q8TAT6 608 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 POLR3FQ9H1D9 316 aaPredicted RBP9.79□□□□□ -0.84
VPS50-207ENST00000458530 DHX33Q9H6R0 707 aaKnown RBP9.79□□□□□ -0.84
VPS50-207ENST00000458530 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 PRKAG2Q9UGJ0 569 aa9.79□□□□□ -0.84
VPS50-207ENST00000458530 ARMCX3Q9UH62 379 aaPredicted RBP9.79□□□□□ -0.84
VPS50-207ENST00000458530 ZHX1Q9UKY1 873 aaPredicted RBP9.79□□□□□ -0.84
VPS50-207ENST00000458530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS50-207ENST00000458530 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 AKR1B15C9JRZ8 316 aaPredicted RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 KIAA0391O15091 583 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 PPFIA4O75335 1185 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 SNAI1O95863 264 aaPredicted RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 CYP2C19P33261 490 aa9.78□□□□□ -0.84
VPS50-207ENST00000458530 PSMC2P35998 433 aaKnown RBP9.78□□□□□ -0.84
VPS50-207ENST00000458530 PBX1P40424 430 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms