RNA–Protein interactions for RNA: ENST00000451998.1

TTC38-205, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 2

Gene TTC38, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-205ENST00000451998 PLCB3Q01970 1234 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 MBTD1Q05BQ5 628 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 NCBP1Q09161 790 aaKnown RBP17.5■□□□□ 0.39
TTC38-205ENST00000451998 DUSP6Q16828 381 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 UBXN11Q5T124 520 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 TMEM173Q86WV6 379 aaPredicted RBP17.5■□□□□ 0.39
TTC38-205ENST00000451998 CDR2LQ86X02 465 aaPredicted RBP17.5■□□□□ 0.39
TTC38-205ENST00000451998 VN1R2Q8NFZ6 395 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 AUTS2Q8WXX7 1259 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 FAM193BQ96PV7 902 aaPredicted RBP17.5■□□□□ 0.39
TTC38-205ENST00000451998 NACC1Q96RE7 527 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 TRAIPQ9BWF2 469 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 TRIM6Q9C030 488 aaPredicted RBP17.5■□□□□ 0.39
TTC38-205ENST00000451998 CLEC1BQ9P126 229 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 DNAJB4Q9UDY4 337 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 HES2Q9Y543 173 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 PLXNA4Q9HCM2 1894 aa17.5■□□□□ 0.39
TTC38-205ENST00000451998 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 SSBP05455 408 aaKnown RBP eCLIP17.49■□□□□ 0.39
TTC38-205ENST00000451998 SRGAP2BP0DMP2 458 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 ITGA4P13612 1032 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 ARL2P36404 184 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 ZP2Q05996 745 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 ORC2Q13416 577 aaPredicted RBP17.49■□□□□ 0.39
TTC38-205ENST00000451998 ZRSR1Q15695 479 aaKnown RBP17.49■□□□□ 0.39
TTC38-205ENST00000451998 NOTUMQ6P988 496 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 PADI6Q6TGC4 694 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 AGMOQ6ZNB7 445 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 SNX29Q8TEQ0 813 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 POLR3CQ9BUI4 534 aaPredicted RBP17.49■□□□□ 0.39
TTC38-205ENST00000451998 C1QTNF1Q9BXJ1 281 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 NRDE2Q9H7Z3 1164 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 POLD4Q9HCU8 107 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 RAPGEFL1Q9UHV5 662 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 IPPQ9Y573 584 aa17.49■□□□□ 0.39
TTC38-205ENST00000451998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 B4GALT3O60512 393 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 NPTXRO95502 500 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 COL9A1P20849 921 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 GJB2P29033 226 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 SLC11A1P49279 550 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 AFF1P51825 1210 aaKnown RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 PTGDRQ13258 359 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 SMC1AQ14683 1233 aaKnown RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 SMAD2Q15796 467 aaKnown RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 PDE12Q6L8Q7 609 aaKnown RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 ADHFE1Q8IWW8 467 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 VPS52Q8N1B4 723 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 MCPH1Q8NEM0 835 aa17.48■□□□□ 0.39
TTC38-205ENST00000451998 BCL7CQ8WUZ0 217 aaPredicted RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 NGRNQ9NPE2 291 aaKnown RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 DBR1Q9UK59 544 aaKnown RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 PRG3Q9Y2Y8 225 aaPredicted RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 USP15Q9Y4E8 981 aaPredicted RBP17.48■□□□□ 0.39
TTC38-205ENST00000451998 ARID2Q68CP9 1835 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 PP2D1A8MPX8 630 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 ZNF623O75123 536 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 ARF4P18085 180 aaPredicted RBP17.47■□□□□ 0.39
TTC38-205ENST00000451998 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.392e-9■■□□□ 11.4
TTC38-205ENST00000451998 RPA1P27694 616 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 MLH1P40692 756 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
TTC38-205ENST00000451998 ZBTB8OSQ8IWT0 167 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 SMG8Q8ND04 991 aaKnown RBP17.47■□□□□ 0.39
TTC38-205ENST00000451998 BSNDQ8WZ55 320 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 MSLNLQ96KJ4 702 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 GAD1Q99259 594 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 CDCA3Q99618 268 aaPredicted RBP17.47■□□□□ 0.39
TTC38-205ENST00000451998 BHMT2Q9H2M3 363 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 NXF3Q9H4D5 531 aaKnown RBP17.47■□□□□ 0.39
TTC38-205ENST00000451998 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 SMC3Q9UQE7 1217 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 CNTNAP2Q9UHC6 1331 aa17.47■□□□□ 0.39
TTC38-205ENST00000451998 CXCL14O95715 111 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 GALTP07902 379 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 XRCC6P12956 609 aaKnown RBP eCLIP17.46■□□□□ 0.39
TTC38-205ENST00000451998 NCLP19338 710 aaKnown RBP17.46■□□□□ 0.39
TTC38-205ENST00000451998 SP100P23497 879 aaPredicted RBP17.46■□□□□ 0.39
TTC38-205ENST00000451998 TOB1P50616 345 aaPredicted RBP17.46■□□□□ 0.39
TTC38-205ENST00000451998 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
TTC38-205ENST00000451998 SCNN1GP51170 649 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 ECM1Q16610 540 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 AMHR2Q16671 573 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
TTC38-205ENST00000451998 SMRP1Q8NCR6 262 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 DEPTORQ8TB45 409 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 CCDC51Q96ER9 411 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 IGSF21Q96ID5 467 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 ZFP42Q96MM3 310 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 KIFC3Q9BVG8 833 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 RAB34Q9BZG1 259 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 CSRNP2Q9H175 543 aa17.46■□□□□ 0.39
TTC38-205ENST00000451998 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
TTC38-205ENST00000451998 PRKAG3Q9UGI9 489 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms