RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 RAD54LQ92698 747 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 EPSTI1Q96J88 318 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 PYM1Q9BRP8 204 aaKnown RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 RUSC1Q9BVN2 902 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 MINDY3Q9H8M7 445 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 KMT5AQ9NQR1 393 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 PCDHB2Q9Y5E7 798 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 CNTNAP2Q9UHC6 1331 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 RALGAPA2Q2PPJ7 1873 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 ACKR2O00590 384 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 N4BP3O15049 544 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 FAM13AO94988 1023 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 PRKCBP05771 671 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 PLS3P13797 630 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 LAG3P18627 525 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 LIG1P18858 919 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 BMPR1AP36894 532 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 STRN3Q13033 797 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 GPM6BQ13491 265 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 EPC2Q52LR7 807 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 SV2BQ7L1I2 683 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 SLC17A8Q8NDX2 589 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 URGCPQ8TCY9 931 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 CLP1Q92989 425 aaKnown RBP13.28□□□□□ -0.28
SMPD4-212ENST00000451542 CLIC6Q96NY7 704 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 FZD8Q9H461 694 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 RC3H2Q9HBD1 1191 aaKnown RBP13.28□□□□□ -0.28
SMPD4-212ENST00000451542 KANSL3Q9P2N6 904 aa13.28□□□□□ -0.28
SMPD4-212ENST00000451542 A0A1B0GUA9 196 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 H3BNC9 293 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 FGFR1P11362 822 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 ITGA4P13612 1032 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 POU3F3P20264 500 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 HOXA11P31270 313 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 NPTX2P47972 431 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 AMPD3Q01432 767 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 PKP1Q13835 747 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 ZNF598Q86UK7 904 aaKnown RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 SPIRE2Q8WWL2 714 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 P2RX5Q93086 422 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 NTPCRQ9BSD7 190 aaKnown RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 SCAND2PQ9GZW5 306 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 LMAN2LQ9H0V9 348 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 CUEDC2Q9H467 287 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 TMEM134Q9H6X4 195 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
SMPD4-212ENST00000451542 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
SMPD4-212ENST00000451542 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 PPM1AP35813 382 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
SMPD4-212ENST00000451542 RAD51AP2Q09MP3 1159 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 MCM6Q14566 821 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 MRPL10Q7Z7H8 261 aaKnown RBP13.26□□□□□ -0.29
SMPD4-212ENST00000451542 NLRC5Q86WI3 1866 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 MYCT1Q8N699 235 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 BSNDQ8WZ55 320 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 PPP2R3CQ969Q6 453 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 CPB2Q96IY4 423 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 FAM193BQ96PV7 902 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-212ENST00000451542 MRPL4Q9BYD3 311 aaKnown RBP13.26□□□□□ -0.29
SMPD4-212ENST00000451542 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 RSAD1Q9HA92 442 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 PUF60Q9UHX1 559 aaKnown RBP13.26□□□□□ -0.29
SMPD4-212ENST00000451542 RCOR1Q9UKL0 485 aa13.26□□□□□ -0.29
SMPD4-212ENST00000451542 FNDC1Q4ZHG4 1894 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-212ENST00000451542 SFI1A8K8P3 1242 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 NR1I2O75469 434 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
SMPD4-212ENST00000451542 GATMP50440 423 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 KRT17Q04695 432 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 MAPK7Q13164 816 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 BMS1Q14692 1282 aaKnown RBP13.25□□□□□ -0.29
SMPD4-212ENST00000451542 AMHR2Q16671 573 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 TIGD5Q53EQ6 642 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 NOMO2Q5JPE7 1267 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 USP49Q70CQ1 688 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 PDILTQ8N807 584 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 GDPD5Q8WTR4 605 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 ZNF558Q96NG5 402 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 REEP2Q9BRK0 252 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 TCHPQ9BT92 498 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
SMPD4-212ENST00000451542 TYW1Q9NV66 732 aaKnown RBP13.25□□□□□ -0.29
SMPD4-212ENST00000451542 ARHGAP28Q9P2N2 729 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms