RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 POMKQ9H5K3 350 aa19.55■□□□□ 0.72
FAM3A-216ENST00000449971 BMP2KQ9NSY1 1161 aaPredicted RBP19.55■□□□□ 0.72
FAM3A-216ENST00000449971 PPME1Q9Y570 386 aa19.55■□□□□ 0.72
FAM3A-216ENST00000449971 DMDP11532 3685 aa19.55■□□□□ 0.72
FAM3A-216ENST00000449971 TPRNQ4KMQ1 711 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 KCNT2Q6UVM3 1135 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 TMEM184AQ6ZMB5 413 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 KSR1Q8IVT5 923 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 TMEM143Q96AN5 459 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 NLRP4Q96MN2 994 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 ZNF558Q96NG5 402 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 DHX33Q9H6R0 707 aaKnown RBP19.54■□□□□ 0.72
FAM3A-216ENST00000449971 TMEM161AQ9NX61 479 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 SORCS3Q9UPU3 1222 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 PLXNA3P51805 1871 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 FAM186AA6NE01 2351 aa19.54■□□□□ 0.72
FAM3A-216ENST00000449971 POTEMA6NI47 508 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 OR52Z1P0C646 297 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 HOXB8P17481 243 aaPredicted RBP19.53■□□□□ 0.72
FAM3A-216ENST00000449971 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
FAM3A-216ENST00000449971 TRAPPC10P48553 1259 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 FAM189BP81408 668 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 KRT17Q04695 432 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 ORC2Q13416 577 aaPredicted RBP19.53■□□□□ 0.72
FAM3A-216ENST00000449971 KCNC3Q14003 757 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 RARS2Q5T160 578 aaKnown RBP19.53■□□□□ 0.72
FAM3A-216ENST00000449971 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 LRRC55Q6ZSA7 311 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 ZNF410Q86VK4 478 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 CASP10Q92851 521 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 INO80BQ9C086 356 aaPredicted RBP19.53■□□□□ 0.72
FAM3A-216ENST00000449971 NGRNQ9NPE2 291 aaKnown RBP19.53■□□□□ 0.72
FAM3A-216ENST00000449971 LZTS1Q9Y250 596 aa19.53■□□□□ 0.72
FAM3A-216ENST00000449971 A0A087WWV3 80 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 PRR23AA6NEV1 266 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 LYPLA2O95372 231 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 GJB2P29033 226 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 PLCB3Q01970 1234 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 NBR1Q14596 966 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 EMC2Q15006 297 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 KANK3Q6NY19 840 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 FRMD5Q7Z6J6 570 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 UBALD2Q8IYN6 164 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 C12orf76Q8N812 135 aaPredicted RBP19.52■□□□□ 0.72
FAM3A-216ENST00000449971 TMEM87AQ8NBN3 555 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 PRPF31Q8WWY3 499 aaKnown RBP19.52■□□□□ 0.72
FAM3A-216ENST00000449971 PSPC1Q8WXF1 523 aaKnown RBP19.52■□□□□ 0.72
FAM3A-216ENST00000449971 CCDC43Q96MW1 224 aaKnown RBP19.52■□□□□ 0.72
FAM3A-216ENST00000449971 CASD1Q96PB1 797 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 TMEM117Q9H0C3 514 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 ANKEF1Q9NU02 776 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 SMC3Q9UQE7 1217 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 COL4A3BPQ9Y5P4 624 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 HCFC2Q9Y5Z7 792 aa19.52■□□□□ 0.72
FAM3A-216ENST00000449971 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 SFPQP23246 707 aaKnown RBP eCLIP19.51■□□□□ 0.71
FAM3A-216ENST00000449971 FLCNQ8NFG4 579 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 PIGOQ8TEQ8 1089 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 TCP11Q8WWU5 503 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 MTRQ99707 1265 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 BACH2Q9BYV9 841 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 ELAC1Q9H777 363 aaKnown RBP19.51■□□□□ 0.71
FAM3A-216ENST00000449971 SPG21Q9NZD8 308 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 LIMD1Q9UGP4 676 aa19.51■□□□□ 0.71
FAM3A-216ENST00000449971 NT5C1B-RDH14C9J2C7 533 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 PROB1E7EW31 1015 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 H3BQV1 296 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 GAS2O43903 313 aaKnown RBP19.5■□□□□ 0.71
FAM3A-216ENST00000449971 PPM1AP35813 382 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 FOXK2Q01167 660 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 LAMTOR4Q0VGL1 99 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 SMC1AQ14683 1233 aaKnown RBP19.5■□□□□ 0.71
FAM3A-216ENST00000449971 CATSPER4Q7RTX7 472 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 ECHDC2Q86YB7 292 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 LRRC43Q8N309 656 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 TDRD5Q8NAT2 981 aaKnown RBP19.5■□□□□ 0.71
FAM3A-216ENST00000449971 ERMNQ8TAM6 284 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 ADAM7Q9H2U9 754 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 CHST12Q9NRB3 414 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 RNF19AQ9NV58 838 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 DACT1Q9NYF0 836 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 DBR1Q9UK59 544 aaKnown RBP19.5■□□□□ 0.71
FAM3A-216ENST00000449971 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.5■□□□□ 0.71
FAM3A-216ENST00000449971 WDR81Q562E7 1941 aa19.5■□□□□ 0.71
FAM3A-216ENST00000449971 ASAP2O43150 1006 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 CLASP2O75122 1294 aaKnown RBP19.49■□□□□ 0.71
FAM3A-216ENST00000449971 SPATA31C1P0DKV0 1188 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 XRCC6P12956 609 aaKnown RBP eCLIP19.49■□□□□ 0.71
FAM3A-216ENST00000449971 TOB1P50616 345 aaPredicted RBP19.49■□□□□ 0.71
FAM3A-216ENST00000449971 NUBP1P53384 320 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 ASTLQ6HA08 431 aaPredicted RBP19.49■□□□□ 0.71
FAM3A-216ENST00000449971 FERMT3Q86UX7 667 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 CATSPER3Q86XQ3 398 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 C4orf32Q8N8J7 132 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 AUTS2Q8WXX7 1259 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 NKD2Q969F2 451 aaPredicted RBP19.49■□□□□ 0.71
FAM3A-216ENST00000449971 NECTIN4Q96NY8 510 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 IFT122Q9HBG6 1241 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 TUFT1Q9NNX1 390 aa19.49■□□□□ 0.71
FAM3A-216ENST00000449971 PCDHB6Q9Y5E3 794 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms