RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PNMA6FA0A0J9YX94 578 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 CALCAP01258 141 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 KRT16P08779 473 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 RASA1P20936 1047 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 ARHGAP4P98171 946 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 CDK17Q00537 523 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 LRRC23Q53EV4 343 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 SRCAPQ6ZRS2 3230 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 POMGNT1Q8WZA1 660 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 P3H4Q92791 437 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 SYNGAP1Q96PV0 1343 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 C11orf70Q9BRQ4 267 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 MAD1L1Q9Y6D9 718 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 MYO3BQ8WXR4 1341 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 ERVV-1B6SEH8 477 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 F5H423 210 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 I3L4J1 428 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 DDX3XO00571 662 aaKnown RBP eCLIP13.26□□□□□ -0.291e-7■■■□□ 18.1
UBE3B-204ENST00000449510 ZBTB39O15060 712 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 RPL21P46778 160 aaKnown RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 KLC1Q07866 573 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 COG2Q14746 738 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 RSAD2Q8WXG1 361 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 ARHGEF26Q96DR7 871 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 PLCB4Q15147 1175 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 LIN9Q5TKA1 542 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 RCSD1Q6JBY9 416 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 DNAJC9Q8WXX5 260 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 CDC42EP4Q9H3Q1 356 aaKnown RBP13.26□□□□□ -0.29
UBE3B-204ENST00000449510 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 NEURL4Q96JN8 1562 aa13.26□□□□□ -0.29
UBE3B-204ENST00000449510 MAP3K7O43318 606 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 MED24O75448 989 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 GH1P01241 217 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 CYP11B2P19099 503 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 ITGA8P53708 1063 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 FAM98CQ17RN3 349 aaKnown RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 QRICH1Q2TAL8 776 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 GRAMD1BQ3KR37 738 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 RHOT2Q8IXI1 618 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 ICA1Q05084 483 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 GPS1Q13098 491 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 SYT2Q8N9I0 419 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 MEGF6O75095 1541 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 FAM187AA6NFU0 413 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 ENTPD5O75356 428 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 PEX3P56589 373 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 ASPRV1Q53RT3 343 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 FGD4Q96M96 766 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 RBM15Q96T37 977 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 AGPAT1Q99943 283 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 DDX50Q9BQ39 737 aaKnown RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 SLC13A1Q9BZW2 595 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 STOML1Q9UBI4 398 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-204ENST00000449510 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
UBE3B-204ENST00000449510 EPHB2P29323 1055 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 PIK3CAP42336 1068 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 SLC8A3P57103 927 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 TMED1Q13445 227 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 NPY5RQ15761 445 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 RUSC1Q9BVN2 902 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 MAK16Q9BXY0 300 aaKnown RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 TRABDQ9H4I3 376 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 RAB20Q9NX57 234 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 MT-ND3P03897 115 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 FNTAP49354 379 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 ITIH3Q06033 890 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 SEPT2Q15019 361 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 BZW1Q7L1Q6 419 aaKnown RBP13.24□□□□□ -0.29
UBE3B-204ENST00000449510 CATSPER3Q86XQ3 398 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 CYP2W1Q8TAV3 490 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
UBE3B-204ENST00000449510 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms