RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 PASD1Q8IV76 773 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 C3orf20Q8ND61 904 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 OPHN1O60890 802 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 MT-ND3P03897 115 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 ESRRAP11474 423 aaPredicted RBP12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SKIP12755 728 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 PRELPP51888 382 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 TMC3Q7Z5M5 1100 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 FUKQ8N0W3 1084 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SNF8Q96H20 258 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 C11orf70Q9BRQ4 267 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SEMA4AQ9H3S1 761 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 PCDHGC5Q9Y5F6 944 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 NDC80O14777 642 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SLC16A4O15374 487 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 RPA1P27694 616 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 BSPRYQ5W0U4 402 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 APBB1IPQ7Z5R6 666 aaPredicted RBP12.01□□□□□ -0.49
ZNF550-204ENST00000447310 C4orf32Q8N8J7 132 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 PYROXD1Q8WU10 500 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SH3GL2Q99962 352 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 TRIM4Q9C037 500 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 ADAM22Q9P0K1 906 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 SCOCQ9UIL1 159 aa12.01□□□□□ -0.49
ZNF550-204ENST00000447310 LRRIQ4A6NIV6 560 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 TRAPPC3O43617 180 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 SMARCA1P28370 1054 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 HNRNPH3P31942 346 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 BASP1P80723 227 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 RNASELQ05823 741 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 ITGB3BPQ13352 177 aaPredicted RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 HADHQ16836 314 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 LRRC55Q6ZSA7 311 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ARMC2Q8NEN0 867 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 FBXO41Q8TF61 875 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 DCAF4Q8WV16 495 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 TSC22D3Q99576 134 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 FAM118BQ9BPY3 351 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 FAM129AQ9BZQ8 928 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 DAGLAQ9Y4D2 1042 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 RTN2O75298 545 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 GGPS1O95749 300 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 IZUMO3Q5VZ72 239 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 CENPUQ71F23 418 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 CEP170P1Q96L14 293 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 SALL4Q9UJQ4 1053 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 CLRN2A0PK11 232 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ENO4A6NNW6 628 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 FOXN3O00409 490 aaPredicted RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 FECHP22830 423 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 TRMT10CQ7L0Y3 403 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 LXNQ9BS40 222 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ATRNO75882 1429 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 GYG2O15488 501 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 CDH16O75309 829 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ATP5HO75947 161 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 PPP4CP60510 307 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 DLGAP5Q15398 846 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ARHGEF16Q5VV41 709 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ZKSCAN4Q969J2 545 aaPredicted RBP12□□□□□ -0.49
ZNF550-204ENST00000447310 ERP27Q96DN0 273 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 VCX3BQ9H321 246 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 ZFP69BQ9UJL9 534 aa12□□□□□ -0.49
ZNF550-204ENST00000447310 STAM2O75886 525 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 ANP32DO95626 131 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 CAV1Q03135 178 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 SCYL2Q6P3W7 929 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 ZC3H18Q86VM9 953 aaKnown RBP11.99□□□□□ -0.49
ZNF550-204ENST00000447310 OSBPL1AQ9BXW6 950 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 PPP1R9AQ9ULJ8 1098 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 MAD1L1Q9Y6D9 718 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 SHOX2O60902 331 aaPredicted RBP11.99□□□□□ -0.49
ZNF550-204ENST00000447310 UBOX5O94941 541 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 IFI35P80217 286 aaPredicted RBP11.99□□□□□ -0.49
ZNF550-204ENST00000447310 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
ZNF550-204ENST00000447310 ARHGAP23Q9P227 1491 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 SCP2P22307 547 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 HMGB2P26583 209 aaKnown RBP11.99□□□□□ -0.49
ZNF550-204ENST00000447310 ERFP50548 548 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 PSMC6P62333 389 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 SYT2Q8N9I0 419 aaPredicted RBP11.99□□□□□ -0.49
ZNF550-204ENST00000447310 MORC4Q8TE76 937 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
ZNF550-204ENST00000447310 L3MBTL1Q9Y468 752 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms