RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TGFB3P10600 412 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 H2AFXP16104 143 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 CXCR5P32302 372 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 USP8P40818 1118 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 NOP2P46087 812 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 LIG4P49917 911 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 DNA2P51530 1060 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 STRN3Q13033 797 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 C1orf220Q5T0J3 134 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 FAM160B1Q5W0V3 765 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 ALKBH5Q6P6C2 394 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 PNMA8AQ86V59 439 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 FBXO16Q8IX29 292 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 SEPT1Q8WYJ6 367 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 MMS19Q96T76 1030 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 PCYT2Q99447 389 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 FAM213AQ9BRX8 229 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 AZI2Q9H6S1 392 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 EFCC1Q9HA90 598 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 SEPT11Q9NVA2 429 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 NAGPAQ9UK23 515 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 ANO9A1A5B4 782 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 FOXN3O00409 490 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 N4BP1O75113 896 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 PALMO75781 387 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 MATR3P43243 847 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 MXI1P50539 228 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 NAB2Q15742 525 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 LDLRAD1Q5T700 205 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC39A4Q6P5W5 647 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 TMCO3Q6UWJ1 677 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 METTL7BQ6UX53 244 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 RNF10Q8N5U6 811 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 LMO3Q8TAP4 145 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 DEPTORQ8TB45 409 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 U2AF1L4Q8WU68 220 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 HVCN1Q96D96 273 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 TMEM117Q9H0C3 514 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 PORCNQ9H237 461 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 DDX41Q9UJV9 622 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 IGKV6D-21A0A0A0MT36 114 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 GLRA2P23416 452 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 PRKCIP41743 596 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 HSDL1Q3SXM5 330 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 NFRKBQ6P4R8 1299 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 TAS1R3Q7RTX0 852 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 TRIM50Q86XT4 487 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 ARHGEF19Q8IW93 802 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 NOA1Q8NC60 698 aaKnown RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 TMEM174Q8WUU8 243 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 ELMO3Q96BJ8 720 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 MROH8Q9H579 483 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 DHX33Q9H6R0 707 aaKnown RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 SNX12Q9UMY4 172 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 MYH11P35749 1972 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 OTOFQ9HC10 1997 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 K7ERI5 159 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 DDX3XO00571 662 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 SOCS7O14512 581 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 FTCDO95954 541 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 COPB2P35606 906 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 RTP1P59025 263 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 C10orf76Q5T2E6 689 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 TMEM63BQ5T3F8 832 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 GLYCTKQ8IVS8 523 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 DHX37Q8IY37 1157 aaKnown RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 GPD1LQ8N335 351 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 COG1Q8WTW3 980 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 COPS5Q92905 334 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 FGD4Q96M96 766 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 SPATA33Q96N06 139 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 PDGFCQ9NRA1 345 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 TOPORSQ9NS56 1045 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 ZNF446Q9NWS9 450 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 ARHGAP28Q9P2N2 729 aa10.33□□□□□ -0.76
COL6A4P1-201ENST00000446690 DOCK5Q9H7D0 1870 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 LRRIQ3A6PVS8 624 aaPredicted RBP10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 H0YCG3 227 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 PDHXO00330 501 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 MAPK13O15264 365 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 SEC31AO94979 1220 aaKnown RBP10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 CCDC172P0C7W6 258 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 TXNP10599 105 aaKnown RBP10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 TNFAIP3P21580 790 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 CKAP4Q07065 602 aaKnown RBP10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 PTPROQ16827 1216 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 CELF3Q5SZQ8 465 aaKnown RBP10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 PPM1KQ8N3J5 372 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 GPRC5AQ8NFJ5 357 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 PARD3BQ8TEW8 1205 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 OSBPL9Q96SU4 736 aa10.32□□□□□ -0.76
COL6A4P1-201ENST00000446690 ANKZF1Q9H8Y5 726 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms