RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 HOOK3Q86VS8 718 aa15.33■□□□□ 0.05
ERCC3-203ENST00000445889 THOC1Q96FV9 657 aaKnown RBP15.33■□□□□ 0.05
ERCC3-203ENST00000445889 PARVGQ9HBI0 331 aa15.33■□□□□ 0.05
ERCC3-203ENST00000445889 TMEM150BA6NC51 233 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 SGPL1O95470 568 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 NDUFB10O96000 172 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 EZRP15311 586 aaKnown RBP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 ELF3P78545 371 aaPredicted RBP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 ZYXQ15942 572 aaKnown RBP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 LRCH2Q5VUJ6 765 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 ANKS4BQ8N8V4 417 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 C3orf20Q8ND61 904 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 GDAP1Q8TB36 358 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 PCDHB18PQ96TA0 734 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 AGPAT1Q99943 283 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 CARD9Q9H257 536 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 CNOT10Q9H9A5 744 aaKnown RBP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 TBK1Q9UHD2 729 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 PCNTO95613 3336 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 EMSYQ7Z589 1322 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 PTGIRP43119 386 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 EIF3BP55884 814 aaKnown RBP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 XRCC4Q13426 336 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 EPC2Q52LR7 807 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 C15orf52Q6ZUT6 534 aaKnown RBP15.33■□□□□ 0.04
ERCC3-203ENST00000445889 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 ZNF720Q7Z2F6 126 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 DYDC1Q8WWB3 177 aa15.33■□□□□ 0.04
ERCC3-203ENST00000445889 ANKRD62A6NC57 917 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 HOXA7P31268 230 aaPredicted RBP15.32■□□□□ 0.04
ERCC3-203ENST00000445889 PPP3CAQ08209 521 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 SH3BP5LQ7L8J4 393 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 ATG4AQ8WYN0 398 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 MBOAT7Q96N66 472 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 SYT11Q9BT88 431 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 VEZTQ9HBM0 779 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 SMCHD1A6NHR9 2005 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 PLIN4Q96Q06 1357 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
ERCC3-203ENST00000445889 DLATP10515 647 aaKnown RBP15.32■□□□□ 0.04
ERCC3-203ENST00000445889 NPEPPSP55786 919 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 KCNJ2P63252 427 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 LACTB2Q53H82 288 aaPredicted RBP15.32■□□□□ 0.04
ERCC3-203ENST00000445889 WLSQ5T9L3 541 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 OTOP1Q7RTM1 612 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 ARMC9Q7Z3E5 817 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 PRCCQ92733 491 aaPredicted RBP15.32■□□□□ 0.04
ERCC3-203ENST00000445889 FIZ1Q96SL8 496 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 HSD17B14Q9BPX1 270 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 CBWD1Q9BRT8 395 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 ADAM33Q9BZ11 813 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 KDM4CQ9H3R0 1056 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 NOD2Q9HC29 1040 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 KCNK9Q9NPC2 374 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 FGFR1OP2Q9NVK5 253 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 SAMD15Q9P1V8 674 aa15.32■□□□□ 0.04
ERCC3-203ENST00000445889 EIF4E1BA6NMX2 242 aaKnown RBP15.31■□□□□ 0.04
ERCC3-203ENST00000445889 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 RASGRF2O14827 1237 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 GH1P01241 217 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 GYS1P13807 737 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 SREBF1P36956 1147 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 ECE1P42892 770 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 MMP13P45452 471 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 BMT2Q1RMZ1 405 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 Q4G0T1 1027 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 EP400NLQ6ZTU2 488 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 CCDC63Q8NA47 563 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 INTUQ9ULD6 942 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 TRIM33Q9UPN9 1127 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 A0A1W2PRG0 241 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 A8MUI8 341 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 CYP26A1O43174 497 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 SPOPO43791 374 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 ATP6V1G2O95670 118 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 GH2P01242 217 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 ARP10275 920 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 RARAP10276 462 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 LLGL2Q6P1M3 1020 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 PRUNE1Q86TP1 453 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 SLC47A2Q86VL8 602 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 STAMBPL1Q96FJ0 436 aa15.31■□□□□ 0.04
ERCC3-203ENST00000445889 CLDN3O15551 220 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 AP3B2Q13367 1082 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
ERCC3-203ENST00000445889 CRY2Q49AN0 593 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 EXOC3L1Q86VI1 746 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
ERCC3-203ENST00000445889 TRIM7Q9C029 511 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 STK38LQ9Y2H1 464 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 TCP11X1B4DZS4 312 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 RIPK2O43353 540 aa15.3■□□□□ 0.04
ERCC3-203ENST00000445889 MGRN1O60291 552 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms