RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 ECHDC2Q86YB7 292 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 CEP57L1Q8IYX8 460 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 FSIP1Q8NA03 581 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 RNF169Q8NCN4 708 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
USP1-203ENST00000442679 DNAJC19Q96DA6 116 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 YME1L1Q96TA2 773 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 TRAIPQ9BWF2 469 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 CCDC113Q9H0I3 377 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 TMEM161AQ9NX61 479 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 HPSEQ9Y251 543 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 FAM237AA0A1B0GTK4 181 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 LCHNA4D1U4 455 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 DGKIO75912 1065 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 CA3P07451 260 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 SKIP12755 728 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 SYKP43405 635 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 NDUFA8P51970 172 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 CSPP1Q1MSJ5 1256 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 LONRF3Q496Y0 759 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 UBXN11Q5T124 520 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 CCDC51Q96ER9 411 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 ELAC1Q9H777 363 aaKnown RBP13.58□□□□□ -0.24
USP1-203ENST00000442679 SLC28A3Q9HAS3 691 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 USP25Q9UHP3 1055 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 USP20Q9Y2K6 914 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 LOXHD1Q8IVV2 1947 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 PHLPP2Q6ZVD8 1323 aa13.58□□□□□ -0.24
USP1-203ENST00000442679 A0A1B0GUA9 196 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 H0YCG3 227 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 TRAK2O60296 914 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 EOMESO95936 686 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 MAPTP10636 758 aaKnown RBP13.57□□□□□ -0.24
USP1-203ENST00000442679 IDEP14735 1019 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 GAP43P17677 238 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 RAB27AP51159 221 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 NCKAP1LP55160 1127 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 NT5DC1Q5TFE4 455 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 SLC27A1Q6PCB7 646 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 HAUS6Q7Z4H7 955 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
USP1-203ENST00000442679 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
USP1-203ENST00000442679 ZNF689Q96CS4 500 aaPredicted RBP13.57□□□□□ -0.24
USP1-203ENST00000442679 C7orf25Q9BPX7 421 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 EIF2AQ9BY44 585 aaKnown RBP13.57□□□□□ -0.24
USP1-203ENST00000442679 TRIM9Q9C026 710 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 GOLPH3LQ9H4A5 285 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 PANK4Q9NVE7 773 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 PCDHB2Q9Y5E7 798 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
USP1-203ENST00000442679 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 N4BP3O15049 544 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 ZNF623O75123 536 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 EDN1P05305 212 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 FGFR1P11362 822 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 SCP2P22307 547 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 AFMP43652 599 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 GATMP50440 423 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 STRN3Q13033 797 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 BTG3Q14201 252 aaPredicted RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 ZNF697Q5TEC3 545 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 PPP2R2DQ66LE6 453 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 TAS1R3Q7RTX0 852 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 MRPL10Q7Z7H8 261 aaKnown RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 SFR1Q86XK3 245 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 FAM178BQ8IXR5 827 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 CCDC65Q8IXS2 484 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 FIBCD1Q8N539 461 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 MRPL4Q9BYD3 311 aaKnown RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 TRIM6Q9C030 488 aaPredicted RBP13.56□□□□□ -0.24
USP1-203ENST00000442679 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 SEL1LQ9UBV2 794 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 MICAL3Q7RTP6 2002 aa13.56□□□□□ -0.24
USP1-203ENST00000442679 TMEM265A0A087WTH1 108 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 TBKBP1A7MCY6 615 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 K7ENM7 598 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 HOXA2O43364 376 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms