RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CCNJLQ8IV13 435 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 FAM186BQ8IYM0 893 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 LRRC8CQ8TDW0 803 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 MRPS27Q92552 414 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 IQCDQ96DY2 449 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 GPATCH3Q96I76 525 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ATP6V1G3Q96LB4 118 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 USP28Q96RU2 1077 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ELAC2Q9BQ52 826 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 BPIFA3Q9BQP9 254 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 NUF2Q9BZD4 464 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PUS3Q9BZE2 481 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 GOLPH3LQ9H4A5 285 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 MRPL44Q9H9J2 332 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 GGT7Q9UJ14 662 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 LRCH1Q9Y2L9 728 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 MAP3K2Q9Y2U5 619 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 RBMX2Q9Y388 322 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 DLC1Q96QB1 1528 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ANKARQ7Z5J8 1434 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ABCC4O15439 1325 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ARPC4-TTLL3A0A0A6YYG9 625 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 MACROD2A1Z1Q3 448 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 NOTOA8MTQ0 251 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CAMTA2O94983 1202 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 IDEP14735 1019 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 FLT3LGP49771 235 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DNA2P51530 1060 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TUBA4AP68366 448 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PHEXP78562 749 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 C2orf54Q08AI8 447 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 SPP2Q13103 211 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 IFIT5Q13325 482 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 TMEM259Q4ZIN3 620 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 WDR45BQ5MNZ6 344 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CCDC122Q5T0U0 273 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PPP4R3AQ6IN85 833 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PPP1R21Q6ZMI0 780 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TRPM8Q7Z2W7 1104 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CABP7Q86V35 215 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TXNRD3Q86VQ6 643 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ANKRD13BQ86YJ7 626 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 LRRC49Q8IUZ0 686 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 VSTM4Q8IW00 320 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 IFT20Q8IY31 132 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 LRRC43Q8N309 656 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CDHR1Q96JP9 859 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ZIM3Q96PE6 472 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 SRPK1Q96SB4 655 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 NUP88Q99567 741 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 PRPF18Q99633 342 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 UNC93B1Q9H1C4 597 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CCSER2Q9H7U1 834 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TRPC7Q9HCX4 862 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DDX18Q9NVP1 670 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 POLLQ9UGP5 575 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DOLKQ9UPQ8 538 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 HEY1Q9Y5J3 304 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 FADS3Q9Y5Q0 445 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 GPC6Q9Y625 555 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 ACACAQ13085 2346 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 LMTK2Q8IWU2 1503 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GPR75-ASB3A0A0A6YYF3 556 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 A0A0J9YVX5 310 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8JA6NMD2 632 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GRXCR1A8MXD5 290 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8TH3BQL2 631 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TXNDC9O14530 226 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MCF2LO15068 1137 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CYTH3O43739 400 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ATP9AO75110 1047 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 IDH1O75874 414 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 ALDH1L1O75891 902 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 STAMBPO95630 424 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 DDX58O95786 925 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8HP0CJ92 632 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PRKACBP22694 351 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 TMOD1P28289 359 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GRK4P32298 578 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CHKAP35790 457 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CD97P48960 835 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SERPINB8P50452 374 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MXI1P50539 228 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KCNJ2P63252 427 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GSTM4Q03013 218 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PRKCZQ05513 592 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KIF5AQ12840 1032 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MTF1Q14872 753 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 NR1D2Q14995 579 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CNPY1Q3B7I2 92 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KRT71Q3SY84 523 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SUPT20HL1Q3ZLR7 823 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PABPC1LQ4VXU2 614 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 TTMPQ5BVD1 217 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MORN1Q5T089 497 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 USP50Q70EL3 339 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 RAB3IL1Q8TBN0 382 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 ENOX1Q8TC92 643 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 OSCP1Q8WVF1 389 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 UBLCP1Q8WVY7 318 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms