RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 C16orf46Q6P387 395 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 FOXR1Q6PIV2 292 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC69Q6ZNQ3 347 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 C1orf186Q6ZWK4 172 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 VSTM4Q8IW00 320 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 EXOC8Q8IYI6 725 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 MYCT1Q8N699 235 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CSGALNACT2Q8N6G5 542 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 SPC24Q8NBT2 197 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC150Q8NCX0 1101 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 GOLGA5Q8TBA6 731 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 MORC4Q8TE76 937 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 IRF7Q92985 503 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 IQCDQ96DY2 449 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 DRC1Q96MC2 740 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 REEP2Q9BRK0 252 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZCCHC2Q9C0B9 1178 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 XPO4Q9C0E2 1151 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 TUT1Q9H6E5 874 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 PARVGQ9HBI0 331 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 TXNRD2Q9NNW7 524 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC39A2Q9NP94 309 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 OLFML3Q9NRN5 406 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 SAMSN1Q9NSI8 373 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 LIMA1Q9UHB6 759 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 DIS3Q9Y2L1 958 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 GDAQ9Y2T3 454 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 PPME1Q9Y570 386 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 DOCK5Q9H7D0 1870 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 UBE4BO95155 1302 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 MCM3APO60318 1980 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC15A5A6NIM6 579 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNJ18B7U540 433 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 H0YCG3 227 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 GPR25O00155 361 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PDXKO00764 312 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 N4BP3O15049 544 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 EIF3DO15371 548 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CALUO43852 315 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCNE2O96020 404 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SUPT20HL2P0C7V6 817 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CYP2C8P10632 490 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ATP1A3P13637 1013 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MPSTP25325 297 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 YWHABP31946 246 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 DNM2P50570 870 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 COPB1P53618 953 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SNRPFP62306 86 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 FKBP3Q00688 224 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PPP2R3AQ06190 1150 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNA1Q09470 495 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 TRIM14Q14142 442 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNJ12Q14500 433 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 HSP90AA2PQ14568 343 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 TTLL4Q14679 1199 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 NR1I3Q14994 352 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 HIF1AQ16665 826 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KNOP1Q1ED39 458 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 BMT2Q1RMZ1 405 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 EDRF1Q3B7T1 1238 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 C11orf91Q3C1V1 193 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 XKR9Q5GH70 373 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 XKR3Q5GH77 459 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM160B1Q5W0V3 765 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SPECC1LQ69YQ0 1117 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ANKRD40Q6AI12 368 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SWSAP1Q6NVH7 229 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 RGMBQ6NW40 437 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 TTI2Q6NXR4 508 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 FIGNL1Q6PIW4 674 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 METTL7BQ6UX53 244 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 TREML4Q6UXN2 200 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ABHD15Q6UXT9 468 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SEPT14Q6ZU15 432 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 EPM2AIP1Q7L775 607 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 HS2ST1Q7LGA3 356 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC186Q7Z3E2 898 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 TMC6Q7Z403 805 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PLEKHH3Q7Z736 793 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 FILIP1Q7Z7B0 1213 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SAPCD2Q86UD0 394 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PPFIBP1Q86W92 1011 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ATCAYQ86WG3 371 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM43AQ8N2R8 423 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MSL3Q8N5Y2 521 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ANKRD13CQ8N6S4 541 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 GPR161Q8N6U8 529 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KIAA0895Q8NCT3 520 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SMC1BQ8NDV3 1235 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC112Q8NEF3 446 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MCPH1Q8NEM0 835 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF507Q8TCN5 953 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 PIGOQ8TEQ8 1089 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF526Q8TF50 670 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 SCFD2Q8WU76 684 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 KIFAP3Q92845 792 aa4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 GTPBP3Q969Y2 492 aaKnown RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF837Q96EG3 531 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P37-201ENST00000439613 MYO19Q96H55 970 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms