RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GRK2P25098 689 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 HNRNPH1P31943 449 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 TRIP13Q15645 432 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 OSBPL8Q9BZF1 889 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 LMCD1Q9NZU5 365 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CHMP2BQ9UQN3 213 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 PNMA8CA0A1B0GUJ8 204 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 LGALS16A8MUM7 142 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CDH16O75309 829 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 SRP72O76094 671 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 WASHC5Q12768 1159 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 KIAA1755Q5JYT7 1200 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 KRT73Q86Y46 540 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 EFHBQ8N7U6 833 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 C19orf18Q8NEA5 215 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 APOL4Q9BPW4 351 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 SLC40A1Q9NP59 571 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 XPO1O14980 1071 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 BIRC5O15392 142 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 MXI1P50539 228 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 KBTBD12Q3ZCT8 623 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 TOGARAM2Q6ZUX3 1019 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 TUBGCP4Q9UGJ1 667 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 LRRN2O75325 713 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ENO1P06733 434 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 RASGRF1Q13972 1273 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CLIC6Q96NY7 704 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 DBNDD2Q9BQY9 259 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■■ 56.2
PTCH1-209ENST00000437951 NOD2Q9HC29 1040 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 TNPO2O14787 897 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ARIH2O95376 493 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 SNAP25P60880 206 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ATAD3BQ5T9A4 648 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 FAM45BPQ6NSW5 357 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ANKS3Q6ZW76 656 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CDKL3Q8IVW4 592 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 MICU2Q8IYU8 434 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 TSPAN17Q96FV3 270 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 NSL1Q96IY1 281 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 KIAA1586Q9HCI6 787 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-209ENST00000437951 IP6K2Q9UHH9 426 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CDY2AQ9Y6F7 541 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 FAM47DPA6NHR8 397 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 PSMD3O43242 534 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 FBXW4P57775 412 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 RBBP7Q16576 425 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 GUCA1CO95843 209 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 LDHAP00338 332 aaKnown RBP12.19□□□□□ -0.46
PTCH1-209ENST00000437951 TPP2P29144 1249 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-209ENST00000437951 LSP1P33241 339 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-209ENST00000437951 CDHR1Q96JP9 859 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 MLXIPQ9HAP2 919 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 CENPXA8MT69 81 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 HABP4Q5JVS0 413 aaKnown RBP12.19□□□□□ -0.46
PTCH1-209ENST00000437951 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 ABI1Q8IZP0 508 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 VPS11Q9H270 941 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 ARHGEF3Q9NR81 526 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 CDYLQ9Y232 598 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 KCNQ4P56696 695 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 KRT33BQ14525 404 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 SH3GLB2Q9NR46 395 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 LRRIQ4A6NIV6 560 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 KRT76Q01546 638 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 RESP18Q5W5W9 173 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 USP1O94782 785 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 PSMC3P17980 439 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 TRIP10Q15642 601 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 SFR1Q86XK3 245 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 P3H2Q8IVL5 708 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 ZBTB10Q96DT7 871 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 KLHL20Q9Y2M5 609 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 SNX24Q9Y343 169 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
PTCH1-209ENST00000437951 STK25O00506 426 aa12.18□□□□□ -0.46
PTCH1-209ENST00000437951 MMP1P03956 469 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms