RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 ATG4AQ8WYN0 398 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 HVCN1Q96D96 273 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 ALG13Q9NP73 1137 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 SEPT10Q9P0V9 454 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 TMEM143Q96AN5 459 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 CBWD1Q9BRT8 395 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 PSD3Q9NYI0 1048 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 ERFP50548 548 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 CFAP36Q96G28 342 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 PURBQ96QR8 312 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 CRAMP1Q96RY5 1269 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 STK33Q9BYT3 514 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 BAZ2AQ9UIF9 1905 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 SLC27A3Q5K4L6 730 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 DHX38Q92620 1227 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 CD248Q9HCU0 757 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 INTUQ9ULD6 942 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 LRRD1A4D1F6 860 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 SNRNP48Q6IEG0 339 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 ARHGEF19Q8IW93 802 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 PPP1R37O75864 691 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 DDR1Q08345 913 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 HOMER3Q9NSC5 361 aa12.5□□□□□ -0.41
PDLIM5-206ENST00000437932 CCDC188H7C350 402 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 SLC16A3O15427 465 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 FGRP09769 529 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 QARSP47897 775 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 CBWD6Q4V339 395 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 CBWD3Q5JTY5 395 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 CBWD5Q5RIA9 395 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 RHOT2Q8IXI1 618 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 TMEM117Q9H0C3 514 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 P4HBP07237 508 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 ARHGEF26Q96DR7 871 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 ESYT2A0FGR8 921 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 KRT81Q14533 505 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 ISCUQ9H1K1 167 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 KCNH7Q9NS40 1196 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 BASP1P80723 227 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 JAMLQ86YT9 394 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 BAP1Q92560 729 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 TAAR1Q96RJ0 339 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 ALG6Q9Y672 507 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 ERVK-9P63128 1117 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 IRX4P78413 519 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 PTGISQ16647 500 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 KIAA1755Q5JYT7 1200 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 RPAP3Q9H6T3 665 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
PDLIM5-206ENST00000437932 CAND2O75155 1236 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 TMEM191BP0C7N4 346 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 ORC1Q13415 861 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 THNSL1Q8IYQ7 743 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 EXOC1LA0A1B0GW35 172 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 TM4SF1P30408 202 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 PCK1P35558 622 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 SPP2Q13103 211 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 MUM1L1Q5H9M0 696 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 APOBEC3HQ6NTF7 200 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 DNAJC19Q96DA6 116 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 NLRP4Q96MN2 994 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 SLC29A2Q14542 456 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 SNRNP35Q16560 246 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 HHIPL2Q6UWX4 724 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 TRIM59Q8IWR1 403 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 ZNF70Q9UC06 446 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms