RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ASAP2O43150 1006 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 USO1O60763 962 aaKnown RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 ZC3H11AO75152 810 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP50-210ENST00000434760 COL9A1P20849 921 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP50-210ENST00000434760 SSTR3P32745 418 aaPredicted RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 TRAPPC10P48553 1259 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 POU5F1BQ06416 359 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 PCBP1Q15365 356 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP50-210ENST00000434760 TMEM184AQ6ZMB5 413 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 C4orf32Q8N8J7 132 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 SMG8Q8ND04 991 aaKnown RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 POLR3CQ9BUI4 534 aaPredicted RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 VN1R3Q9BXE9 311 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 ZBP1Q9H171 429 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 POLR3FQ9H1D9 316 aaPredicted RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 NGRNQ9NPE2 291 aaKnown RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 DNAJB4Q9UDY4 337 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 RAPGEFL1Q9UHV5 662 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.4
NUP50-210ENST00000434760 INPP5FQ9Y2H2 1132 aa17.52■□□□□ 0.4
NUP50-210ENST00000434760 CNTNAP2Q9UHC6 1331 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 INPPL1O15357 1258 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 NCLP19338 710 aaKnown RBP17.51■□□□□ 0.39
NUP50-210ENST00000434760 TOB1P50616 345 aaPredicted RBP17.51■□□□□ 0.39
NUP50-210ENST00000434760 ZNF174Q15697 407 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
NUP50-210ENST00000434760 MICAL1Q8TDZ2 1067 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 SUSD6Q92537 303 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 CCDC51Q96ER9 411 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 EIF2AQ9BY44 585 aaKnown RBP17.51■□□□□ 0.39
NUP50-210ENST00000434760 RSAD1Q9HA92 442 aa17.51■□□□□ 0.39
NUP50-210ENST00000434760 USP15Q9Y4E8 981 aaPredicted RBP17.51■□□□□ 0.39
NUP50-210ENST00000434760 MUC6Q6W4X9 2439 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 MYH11P35749 1972 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 TRIP11Q15643 1979 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 FAM86C2PA6NEL3 165 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 C2orf71A6NGG8 1288 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 B4GALT5O43286 388 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 ERLIN2O94905 339 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 XRCC6P12956 609 aaKnown RBP eCLIP17.5■□□□□ 0.39
NUP50-210ENST00000434760 ARF4P18085 180 aaPredicted RBP17.5■□□□□ 0.39
NUP50-210ENST00000434760 RPA1P27694 616 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 TECP42680 631 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 SLC11A1P49279 550 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
NUP50-210ENST00000434760 TFDP1Q14186 410 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 ZNF280BQ86YH2 543 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 FAM184AQ8NB25 1140 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 BSNDQ8WZ55 320 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 PGBD4Q96DM1 585 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 TMEM169Q96HH4 297 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 IGSF21Q96ID5 467 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 CCDC43Q96MW1 224 aaKnown RBP17.5■□□□□ 0.39
NUP50-210ENST00000434760 POP1Q99575 1024 aaKnown RBP17.5■□□□□ 0.39
NUP50-210ENST00000434760 LRFN3Q9BTN0 628 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
NUP50-210ENST00000434760 IPPQ9Y573 584 aa17.5■□□□□ 0.39
NUP50-210ENST00000434760 INO80B-WBP1J3KQ70 363 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 GPR37L1O60883 481 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 DDHD2O94830 711 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 GALTP07902 379 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 AXLP30530 894 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 ALDH7A1P49419 539 aaKnown RBP17.49■□□□□ 0.39
NUP50-210ENST00000434760 KRT17Q04695 432 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
NUP50-210ENST00000434760 ECM1Q16610 540 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 NOTUMQ6P988 496 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 SYCE2Q6PIF2 218 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 TMC7Q7Z402 723 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 MRPL43Q8N983 215 aaKnown RBP17.49■□□□□ 0.39
NUP50-210ENST00000434760 CPB2Q96IY4 423 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 CSRNP2Q9H175 543 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 NXF3Q9H4D5 531 aaKnown RBP17.49■□□□□ 0.39
NUP50-210ENST00000434760 ZMYM2Q9UBW7 1377 aa17.49■□□□□ 0.39
NUP50-210ENST00000434760 DCXO43602 365 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 HAUS3Q68CZ6 603 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 ANKRD54Q6NXT1 300 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 IGSF22Q8N9C0 903 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 MCPH1Q8NEM0 835 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 URGCPQ8TCY9 931 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 S1PR5Q9H228 398 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 HES2Q9Y543 173 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 PCDHB6Q9Y5E3 794 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 HCFC2Q9Y5Z7 792 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 IRAK3Q9Y616 596 aa17.48■□□□□ 0.39
NUP50-210ENST00000434760 VWA8A3KMH1 1905 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 CARNS1A5YM72 827 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 LOC730098B7Z3J9 87 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 EFEMP2O95967 443 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 EDN1P05305 212 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 CTSAP10619 480 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 MUTP22033 750 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 MLH1P40692 756 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
NUP50-210ENST00000434760 DSC1Q08554 894 aa17.47■□□□□ 0.39
NUP50-210ENST00000434760 CBX2Q14781 532 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms