RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MYCBPQ99417 103 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 JPH2Q9BR39 696 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 GAP43P17677 238 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 SNX1Q13596 522 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 TRIP13Q15645 432 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 ODF2Q5BJF6 829 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 SLC47A2Q86VL8 602 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 TRIM50Q86XT4 487 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 AGO4Q9HCK5 861 aaKnown RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 TUFT1Q9NNX1 390 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 ANO9A1A5B4 782 aa16.83■□□□□ 0.29
SCARF1-203ENST00000434376 ADRB2P07550 413 aa16.83■□□□□ 0.29
SCARF1-203ENST00000434376 ZNF526Q8TF50 670 aaPredicted RBP16.83■□□□□ 0.29
SCARF1-203ENST00000434376 BSNDQ8WZ55 320 aa16.83■□□□□ 0.29
SCARF1-203ENST00000434376 SIX2Q9NPC8 291 aa16.83■□□□□ 0.29
SCARF1-203ENST00000434376 F8VZ95 297 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 TTI1O43156 1089 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 GJB6O95452 261 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 PGK2P07205 417 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 SOX5P35711 763 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 IGBP1P78318 339 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 MAPK7Q13164 816 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 EPM2AIP1Q7L775 607 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-203ENST00000434376 PLEKHO2Q8TD55 490 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 TATDN2Q93075 761 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 CCDC113Q9H0I3 377 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 DAPK3O43293 454 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 DDNO94850 711 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-203ENST00000434376 HNRNPH3P31942 346 aaKnown RBP16.83■□□□□ 0.28
SCARF1-203ENST00000434376 KCNJ1P48048 391 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 PPP2R5CQ13362 524 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 TNFAIP1Q13829 316 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 MCTP2Q6DN12 878 aa16.83■□□□□ 0.28
SCARF1-203ENST00000434376 COL4A5P29400 1685 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 AGPSO00116 658 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 VWA5AO00534 786 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 KIF4AO95239 1232 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 MOXD1Q6UVY6 613 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 TAS1R2Q8TE23 839 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 OTUD5Q96G74 571 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 NOC2LQ9Y3T9 749 aaKnown RBP16.82■□□□□ 0.28
SCARF1-203ENST00000434376 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 PHF20L1A8MW92 1017 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 SPOPO43791 374 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 SRGAP2CP0DJJ0 459 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 COL11A2P13942 1736 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-203ENST00000434376 CNGA1P29973 690 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 GUCY1A3Q02108 690 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 CETN1Q12798 172 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 PPFIA1Q13136 1202 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 MTM1Q13496 603 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 CFAP58Q5T655 872 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 ANO5Q75V66 913 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 XXYLT1Q8NBI6 393 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 SPIRE2Q8WWL2 714 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 ZNF541Q9H0D2 1346 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 RNF19AQ9NV58 838 aa16.82■□□□□ 0.28
SCARF1-203ENST00000434376 ZNF862O60290 1169 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 HNRNPH1P31943 449 aaKnown RBP16.81■□□□□ 0.28
SCARF1-203ENST00000434376 PTGER2P43116 358 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 DMP1Q13316 513 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-203ENST00000434376 SCARA3Q6AZY7 606 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 CASKIN2Q8WXE0 1202 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 TRIM7Q9C029 511 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 APEX2Q9UBZ4 518 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 SART1O43290 800 aaKnown RBP16.81■□□□□ 0.28
SCARF1-203ENST00000434376 RPS6KA5O75582 802 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 GJB1P08034 283 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 NPTX2P47972 431 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 ADCY1Q08828 1119 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 CEP85LQ5SZL2 805 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 CCDC60Q8IWA6 550 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-203ENST00000434376 FIZ1Q96SL8 496 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 KLHL11Q9NVR0 708 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 AIPL1Q9NZN9 384 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
SCARF1-203ENST00000434376 MMEP08473 750 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 CD58P19256 250 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 MAP2K2P36507 400 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 SNRNP35Q16560 246 aaKnown RBP16.81■□□□□ 0.28
SCARF1-203ENST00000434376 AGBL3Q8NEM8 1001 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 TPCN2Q8NHX9 752 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 KRT35Q92764 455 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 TEPSINQ96N21 525 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 ACCSQ96QU6 501 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 PXMP2Q9NR77 195 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 OLFML3Q9NRN5 406 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 AMFRQ9UKV5 643 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 MYH11P35749 1972 aa16.81■□□□□ 0.28
SCARF1-203ENST00000434376 WDR46O15213 610 aaKnown RBP16.8■□□□□ 0.28
SCARF1-203ENST00000434376 SMTNP53814 917 aa16.8■□□□□ 0.28
SCARF1-203ENST00000434376 POLGP54098 1239 aaPredicted RBP16.8■□□□□ 0.28
SCARF1-203ENST00000434376 ZNF280CQ8ND82 737 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms