RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 NUP98P52948 1817 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 CCDC69A6NI79 296 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 BECN2A8MW95 431 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 SLC4A1P02730 911 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TFRCP02786 760 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 POU4F2Q12837 409 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 SUPT20HL1Q3ZLR7 823 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 KIF6Q6ZMV9 814 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 LIAT1Q6ZQX7 453 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 C7orf61Q8IZ16 206 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 CCAR2Q8N163 923 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 FRS2Q8WU20 508 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ZFPM2Q8WW38 1151 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ZNF669Q96BR6 464 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ATG4CQ96DT6 458 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 DDX11Q96FC9 970 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 FUBP3Q96I24 572 aaKnown RBP eCLIP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 KCNH6Q9H252 994 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 BOLA2Q9H3K6 86 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 DBNDD1Q9H9R9 158 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 INTS7Q9NVH2 962 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ASTN2O75129 1339 aaPredicted RBP6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 ADGRA2Q96PE1 1338 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 RRN3P2A6NIE6 340 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 KCNQ3O43525 872 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 TAF5LO75529 589 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 EPHX1P07099 455 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 CNTFP26441 200 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 ADCYAP1R1P41586 468 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 ATP11AP98196 1134 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 ROR1Q01973 937 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 NR5A1Q13285 461 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 MTA1Q13330 715 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 MINDY4Q4G0A6 757 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 NUGGCQ68CJ6 796 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 FBXO38Q6PIJ6 1188 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 DHX40Q8IX18 779 aaKnown RBP6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 CPA6Q8N4T0 437 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 KIAA1191Q96A73 305 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 VMP1Q96GC9 406 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 CDK5RAP3Q96JB5 506 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 GRIP2Q9C0E4 1043 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 GPAMQ9HCL2 828 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 FAM53CQ9NYF3 392 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 USP16Q9Y5T5 823 aa6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 V9GYY5 206 aaPredicted RBP6.84□□□□□ -1.31
NIPAL3-205ENST00000432012 E2F8A0AVK6 867 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 BTBD11A6QL63 1104 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 KIF2AO00139 706 aaPredicted RBP6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 TPP1O14773 563 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 ATE1O95260 518 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 SOD2P04179 222 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 ITGAVP06756 1048 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 PSAPP07602 524 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 ARAFP10398 606 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 FGFR4P22455 802 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 RAD52P43351 418 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 GSDMDP57764 484 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 CEBPZQ03701 1054 aaKnown RBP6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 NBPF9Q3BBW0 867 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 FAM133BQ5BKY9 247 aaKnown RBP6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 DACT2Q5SW24 774 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 Q6ZUG5 572 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 Q6ZVU0 165 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 CATIPQ7Z7H3 387 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 PPFIBP1Q86W92 1011 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 PLD6Q8N2A8 252 aaKnown RBP6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 USP7Q93009 1102 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 OSBP2Q969R2 916 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 SUCLG2Q96I99 432 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 MRGPRX2Q96LB1 330 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 FGD4Q96M96 766 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 NEK1Q96PY6 1258 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 TBCBQ99426 244 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 SLX1AQ9BQ83 275 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 SEMA6BQ9H3T3 888 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 GOLPH3LQ9H4A5 285 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 ANO10Q9NW15 660 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 TRMT1Q9NXH9 659 aaKnown RBP6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.32
NIPAL3-205ENST00000432012 ALPK3Q96L96 1907 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 GRM8O00222 908 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 PRODHO43272 600 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 TLR2O60603 784 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SLU7O95391 586 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 NTSR2O95665 410 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 CPEP16870 476 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 ABCB4P21439 1286 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 MPP1Q00013 466 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SNW1Q13573 536 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SMAD1Q15797 465 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 CCDC73Q6ZRK6 1079 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 GPR155Q7Z3F1 870 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 DNAJB7Q7Z6W7 309 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 CEP57L1Q8IYX8 460 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms