RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 XBP1P17861 261 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 HOXA11P31270 313 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 VCPP55072 806 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 EPHA7Q15375 998 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 TMC5Q6UXY8 1006 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 ZNF710Q8N1W2 664 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 RABGGTAQ92696 567 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 CASP10Q92851 521 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 EIF2AK1Q9BQI3 630 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 INO80BQ9C086 356 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 DHX33Q9H6R0 707 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 KMT2EQ8IZD2 1858 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 MYO15AQ9UKN7 3530 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 EPB41L2O43491 1005 aaKnown RBP15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 SLITRK3O94933 977 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 SEC24BO95487 1268 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 NEFLP07196 543 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 TXKP42681 527 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 MRE11P49959 708 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 TAS1R1Q7RTX1 841 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 ASAP3Q8TDY4 903 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 PIGOQ8TEQ8 1089 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 TNFRSF25Q93038 417 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 MTRQ99707 1265 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 XPNPEP1Q9NQW7 623 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 CACNG4Q9UBN1 327 aa15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
SMARCE1-205ENST00000431889 GCFC2P16383 781 aaKnown RBP15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 CDC42EP1Q00587 391 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 PTPN21Q16825 1174 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 C4orf19Q8IY42 314 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 SMG8Q8ND04 991 aaKnown RBP15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 URGCPQ8TCY9 931 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 ADAM7Q9H2U9 754 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 RSAD1Q9HA92 442 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 FAM86C1Q9NVL1 165 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
SMARCE1-205ENST00000431889 C2orf16Q68DN1 1984 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 PLXNA3P51805 1871 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 INO80B-WBP1J3KQ70 363 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 B4GALT5O43286 388 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 BAG4O95429 457 aaKnown RBP15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 CTSAP10619 480 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 MLH1P40692 756 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 RFC5P40937 340 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 ST3GAL1Q11201 340 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 CALCRLQ16602 461 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 CES5AQ6NT32 575 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 DDX53Q86TM3 631 aaKnown RBP15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 KREMEN2Q8NCW0 462 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 NSUN7Q8NE18 718 aaKnown RBP15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 PGBD4Q96DM1 585 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 ASIC4Q96FT7 647 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 B3GALT6Q96L58 329 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 ZFP42Q96MM3 310 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 FAM193BQ96PV7 902 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 JPH2Q9BR39 696 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 TRAIPQ9BWF2 469 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 ZSWIM4Q9H7M6 989 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 GPRC5CQ9NQ84 441 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 USP20Q9Y2K6 914 aa15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 TDRD15B5MCY1 1934 aaKnown RBP15.89■□□□□ 0.13
SMARCE1-205ENST00000431889 POTEMA6NI47 508 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 NRP1O14786 923 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 TSPAN1O60635 241 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 ZNF623O75123 536 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 ERLIN2O94905 339 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 SKIP12755 728 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 AKAP5P24588 427 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 OR1G1P47890 313 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 NEK4P51957 841 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 PTPN14Q15678 1187 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 FAM43BQ6ZT52 329 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 SRGAP1Q7Z6B7 1085 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 SUGP1Q8IWZ8 645 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 SLC22A17Q8WUG5 538 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 GAD1Q99259 594 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 TMEM60Q9H2L4 133 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 POLD4Q9HCU8 107 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 KLK14Q9P0G3 267 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 DBR1Q9UK59 544 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 FAN1Q9Y2M0 1017 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 IPPQ9Y573 584 aa15.88■□□□□ 0.13
SMARCE1-205ENST00000431889 TBX3O15119 743 aa15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 USO1O60763 962 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 DKC1O60832 514 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 BRD1O95696 1058 aa15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 CNPP09543 421 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 SPATA31D3P0C874 917 aa15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 ITGA4P13612 1032 aa15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 HOXB8P17481 243 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 KLRC2P26717 231 aa15.87■□□□□ 0.13
SMARCE1-205ENST00000431889 RAB27AP51159 221 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms