RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GMNCA6NCL1 334 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 GLTPD2A6NH11 291 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 DCDC2CA8MYV0 355 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 MEIS2O14770 477 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 SLC12A3P55017 1021 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 ORC2Q13416 577 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 CUL1Q13616 776 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 CRY2Q49AN0 593 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 CBWD6Q4V339 395 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 CBWD3Q5JTY5 395 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 CBWD5Q5RIA9 395 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 KAZNQ674X7 775 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 TMEM179Q6ZVK1 233 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 HOOK3Q86VS8 718 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 ANKS4BQ8N8V4 417 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 C1orf54Q8WWF1 131 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 ARHGEF26Q96DR7 871 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 NAP1L3Q99457 506 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 KIFC3Q9BVG8 833 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 ISCUQ9H1K1 167 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 GANQ9H2C0 597 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 KCTD10Q9H3F6 313 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 INTS9Q9NV88 658 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 HACL1Q9UJ83 578 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 CCPG1Q9ULG6 757 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 SNED1Q8TER0 1413 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 ASTN2O75129 1339 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 A0A1W2PRG0 241 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 HIP1RO75146 1068 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 NF2P35240 595 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 PPP2R2AP63151 447 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 SATB1Q01826 763 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 AP3B2Q13367 1082 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 MTM1Q13496 603 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 IRF2BP2Q7Z5L9 587 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 MSL3Q8N5Y2 521 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 NEK9Q8TD19 979 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 KAT5Q92993 513 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 C18orf8Q96DM3 657 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 NCAPGQ9BPX3 1015 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 TACO1Q9BSH4 297 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 TEKT3Q9BXF9 490 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 CD248Q9HCU0 757 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 GPRC5CQ9NQ84 441 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 CCDC188H7C350 402 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 CYP26A1O43174 497 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 EYA4O95677 639 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 MMEP08473 750 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 ARP10275 920 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 HNRNPH1P31943 449 aaKnown RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 MXI1P50539 228 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 ZCWPW2Q504Y3 356 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 CYP4F22Q6NT55 531 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 HIBCHQ6NVY1 386 aaPredicted RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 PADI6Q6TGC4 694 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 DPH6Q7L8W6 267 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 PALB2Q86YC2 1186 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 PASD1Q8IV76 773 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 FBXO25Q8TCJ0 367 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 RFFLQ8WZ73 363 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 CAVIN3Q969G5 261 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 CYFIP2Q96F07 1278 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 NACC1Q96RE7 527 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 FAM114A2Q9NRY5 505 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 AIPL1Q9NZN9 384 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 ALG6Q9Y672 507 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 UBR2Q8IWV8 1755 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 IPO5O00410 1097 aaKnown RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 CAND2O75155 1236 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 APOBEC3HQ6NTF7 200 aaKnown RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 MORC4Q8TE76 937 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 DCAF4Q8WV16 495 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 FAM20AQ96MK3 541 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 GDF3Q9NR23 364 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 PCDHGC5Q9Y5F6 944 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 ECM29Q5VYK3 1845 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 CENPFP49454 3210 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 MYCP01106 439 aaPredicted RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 SPATA31C1P0DKV0 1188 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 GAP43P17677 238 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 TNNI1P19237 187 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 GUCY2CP25092 1073 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 MARCKSL1P49006 195 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 SLC29A2Q14542 456 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 SEPT7Q16181 437 aaKnown RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 C10orf76Q5T2E6 689 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 IQCKQ8N0W5 287 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 POP1Q99575 1024 aaKnown RBP8.67□□□□□ -1.02
HPS4-205ENST00000429411 CBWD1Q9BRT8 395 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 TCHPQ9BT92 498 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 HAUS2Q9NVX0 235 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 GGA3Q9NZ52 723 aa8.67□□□□□ -1.02
HPS4-205ENST00000429411 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.67□□□□□ -1.02
HPS4-205ENST00000429411 CACNA1SQ13698 1873 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms