RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-205ENST00000427561 LIMD1Q9UGP4 676 aa15.31■□□□□ 0.04
UBA1-205ENST00000427561 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 ASAP2O43150 1006 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 MARCH6O60337 910 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 DDHD2O94830 711 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 SRGAP2CP0DJJ0 459 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 GCFC2P16383 781 aaKnown RBP15.3■□□□□ 0.04
UBA1-205ENST00000427561 XBP1P17861 261 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 RFC5P40937 340 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 PTPN14Q15678 1187 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 OTUD6AQ7L8S5 288 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 NEK8Q86SG6 692 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 ZNF280BQ86YH2 543 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 TCP11Q8WWU5 503 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
UBA1-205ENST00000427561 KLHL5Q96PQ7 755 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
UBA1-205ENST00000427561 TMEM175Q9BSA9 504 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 EMILIN2Q9BXX0 1053 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
UBA1-205ENST00000427561 RSAD1Q9HA92 442 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 FAM86C1Q9NVL1 165 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 CNTNAP2Q9UHC6 1331 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 KCNJ14Q9UNX9 436 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
UBA1-205ENST00000427561 H0Y858 1186 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 TBX3O15119 743 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 GAS2O43903 313 aaKnown RBP15.29■□□□□ 0.04
UBA1-205ENST00000427561 CDKL5O76039 1030 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 ASGR2P07307 311 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 KLRC2P26717 231 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 EPHA7Q15375 998 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 TMC5Q6UXY8 1006 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 GPR149Q86SP6 731 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 ZNF579Q8NAF0 562 aaKnown RBP15.29■□□□□ 0.04
UBA1-205ENST00000427561 CNNM3Q8NE01 707 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 TMEM143Q96AN5 459 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 ACSF2Q96CM8 615 aaPredicted RBP15.29■□□□□ 0.04
UBA1-205ENST00000427561 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 VN1R3Q9BXE9 311 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 SFXN1Q9H9B4 322 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 PLXNA3P51805 1871 aa15.29■□□□□ 0.04
UBA1-205ENST00000427561 ZDBF2Q9HCK1 2354 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 TRIOO75962 3097 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 MTCL1Q9Y4B5 1905 aaKnown RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 B4GALT3O60512 393 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 CCNT1O60563 726 aaKnown RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 GFRA3O60609 400 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 HOXA11P31270 313 aaPredicted RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 YWHABP31946 246 aaKnown RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 LAMTOR4Q0VGL1 99 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 LXNQ9BS40 222 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 SMOC2Q9H3U7 446 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 MINDY3Q9H8M7 445 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 UBN1Q9NPG3 1134 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 MRPL17Q9NRX2 175 aaKnown RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
UBA1-205ENST00000427561 SSX2IPQ9Y2D8 614 aa15.28■□□□□ 0.04
UBA1-205ENST00000427561 WDFY4Q6ZS81 3184 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 NRP1O14786 923 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 LILRB3O75022 631 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 ERLIN2O94905 339 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 BAG4O95429 457 aaKnown RBP15.27■□□□□ 0.04
UBA1-205ENST00000427561 POMCP01189 267 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBA1-205ENST00000427561 CNPP09543 421 aaKnown RBP15.27■□□□□ 0.04
UBA1-205ENST00000427561 NCLP19338 710 aaKnown RBP15.27■□□□□ 0.04
UBA1-205ENST00000427561 CLCN4P51793 760 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 AFF1P51825 1210 aaKnown RBP15.27■□□□□ 0.04
UBA1-205ENST00000427561 NCBP1Q09161 790 aaKnown RBP15.27■□□□□ 0.04
UBA1-205ENST00000427561 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBA1-205ENST00000427561 XKR9Q5GH70 373 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 UBXN11Q5T124 520 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 CCDC149Q6ZUS6 474 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 FERMT3Q86UX7 667 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 SLFN12Q8IYM2 578 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 TMEM105Q8N8V8 129 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 RNF149Q8NC42 400 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 HAS1Q92839 578 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 MFSD1Q9H3U5 465 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 ZSWIM4Q9H7M6 989 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
UBA1-205ENST00000427561 RGL1Q9NZL6 768 aa15.27■□□□□ 0.04
UBA1-205ENST00000427561 STK36Q9NRP7 1315 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 SOD2P04179 222 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 ITGA4P13612 1032 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 AXLP30530 894 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 CLCN5P51795 746 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 SCRN1Q12765 414 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 EMC2Q15006 297 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 ASTLQ6HA08 431 aaPredicted RBP15.26■□□□□ 0.03
UBA1-205ENST00000427561 NCAPH2Q6IBW4 605 aa15.26■□□□□ 0.03
UBA1-205ENST00000427561 C15orf39Q6ZRI6 1047 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms