RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 KCND2Q9NZV8 630 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 HES2Q9Y543 173 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 MEIS3P2A8K0S8 358 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 EDN1P05305 212 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 CMA1P23946 247 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 ZNF697Q5TEC3 545 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 APOL6Q9BWW8 343 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 ZNF576Q9H609 170 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 PARVGQ9HBI0 331 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
SMIM12-203ENST00000426886 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 LARSQ9P2J5 1176 aaKnown RBP13.82□□□□□ -0.2
SMIM12-203ENST00000426886 TCHHQ07283 1943 aa13.82□□□□□ -0.2
SMIM12-203ENST00000426886 MICAL3Q7RTP6 2002 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 A0A0U1RQF3 1178 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 STAG3L1P0CL83 205 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 NDUFA8P51970 172 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 SMTNP53814 917 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 PRPF4BQ13523 1007 aaKnown RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 NPAS4Q8IUM7 802 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 NFKBIZQ9BYH8 718 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 FZD8Q9H461 694 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 C1orf112Q9NSG2 853 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 FAM105AQ9NUU6 356 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 SERTAD1Q9UHV2 236 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 RRP9O43818 475 aaKnown RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 DGKIO75912 1065 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 TIPINQ9BVW5 301 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 GOLPH3LQ9H4A5 285 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 RNF19AQ9NV58 838 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
SMIM12-203ENST00000426886 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 PCDHB2Q9Y5E7 798 aa13.81□□□□□ -0.2
SMIM12-203ENST00000426886 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 NMT1P30419 496 aaKnown RBP13.8□□□□□ -0.2
SMIM12-203ENST00000426886 NOTUMQ6P988 496 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 ARNTL2Q8WYA1 636 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 SEMA6BQ9H3T3 888 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 TTC3P53804 2025 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 RFXAPO00287 272 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 TRAK2O60296 914 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 SYKP43405 635 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 EFNA5P52803 228 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 FAM189BP81408 668 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 TAP1Q03518 808 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 HERC4Q5GLZ8 1057 aaPredicted RBP13.8□□□□□ -0.2
SMIM12-203ENST00000426886 CEP57L1Q8IYX8 460 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 CRIPAKQ8N1N5 446 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 DNAJC19Q96DA6 116 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 INPP5FQ9Y2H2 1132 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
SMIM12-203ENST00000426886 K7ENM7 598 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 ACKR2O00590 384 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 NPTXRO95502 500 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 ATF7P17544 494 aaPredicted RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 ZC2HC1CQ53FD0 456 aaPredicted RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 TAS1R3Q7RTX0 852 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 HAUS6Q7Z4H7 955 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 SFR1Q86XK3 245 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 TMEM161BQ8NDZ6 487 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 HELQQ8TDG4 1101 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 HPS3Q969F9 1004 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 CCDC113Q9H0I3 377 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 KBTBD4Q9NVX7 518 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 ARHGAP28Q9P2N2 729 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 LINC01553A4QN01 128 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 CSPG5O95196 566 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 NT5DC1Q5TFE4 455 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 NTPCRQ9BSD7 190 aaKnown RBP13.79□□□□□ -0.2
SMIM12-203ENST00000426886 C17orf80Q9BSJ5 609 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 TCHPQ9BT92 498 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 PRDM12Q9H4Q4 367 aa13.79□□□□□ -0.2
SMIM12-203ENST00000426886 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 AKAP5P24588 427 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 AFF1P51825 1210 aaKnown RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ASIC1P78348 528 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms