RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 FERP16591 822 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 ODF2Q5BJF6 829 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 UBAP2Q5T6F2 1119 aaKnown RBP14.04□□□□□ -0.16
COL12A1-205ENST00000425443 DCAF12L1Q5VU92 463 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 FAXDC2Q96IV6 333 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 MXRA8Q9BRK3 442 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 ZNF232Q9UNY5 417 aa14.04□□□□□ -0.16
COL12A1-205ENST00000425443 TISP43B9A030 160 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 E7EVH7 732 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 PADI6Q6TGC4 694 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 LMBR1Q8WVP7 490 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 TRIM51Q9BSJ1 452 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 SUDS3Q9H7L9 328 aaPredicted RBP14.03□□□□□ -0.16
COL12A1-205ENST00000425443 LARSQ9P2J5 1176 aaKnown RBP14.03□□□□□ -0.16
COL12A1-205ENST00000425443 WRAP73Q9P2S5 460 aaPredicted RBP14.03□□□□□ -0.16
COL12A1-205ENST00000425443 ODF2LQ9ULJ1 636 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 SMIM23A6NLE4 172 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 MEFVO15553 781 aaPredicted RBP14.03□□□□□ -0.16
COL12A1-205ENST00000425443 EVI5O60447 810 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 FMO5P49326 533 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 PALB2Q86YC2 1186 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 ARL10Q8N8L6 244 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 AGPAT3Q9NRZ7 376 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 KCNH7Q9NS40 1196 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 SLC12A6Q9UHW9 1150 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
COL12A1-205ENST00000425443 ZMYM2Q9UBW7 1377 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 FRMPD4Q14CM0 1322 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 NFIBO00712 420 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 MYCLP12524 364 aaPredicted RBP14.02□□□□□ -0.16
COL12A1-205ENST00000425443 AADACL2Q6P093 401 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 SLFN11Q7Z7L1 901 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.16
COL12A1-205ENST00000425443 PPP1R9AQ9ULJ8 1098 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 CNTNAP1P78357 1384 aa14.02□□□□□ -0.16
COL12A1-205ENST00000425443 PGRMC1O00264 195 aaKnown RBP14.02□□□□□ -0.17
COL12A1-205ENST00000425443 CTNNA1P35221 906 aaKnown RBP14.02□□□□□ -0.17
COL12A1-205ENST00000425443 GALCP54803 685 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 MYL7Q01449 175 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 CETN1Q12798 172 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 MCF2L2Q86YR7 1114 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.17
COL12A1-205ENST00000425443 ERVK-5Q9HDB9 667 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 TAS2R14Q9NYV8 317 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 ZNRF3Q9ULT6 936 aa14.02□□□□□ -0.17
COL12A1-205ENST00000425443 COL2A1P02458 1487 aaPredicted RBP14.02□□□□□ -0.17
COL12A1-205ENST00000425443 GOLGA6L10A6NI86 522 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 HMGB1P1B2RPK0 211 aaPredicted RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 ICAM1P05362 532 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 EIF2AK2P19525 551 aaKnown RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 ABCD1P33897 745 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 PRKCIP41743 596 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 DRAP1Q14919 205 aaPredicted RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 CBWD6Q4V339 395 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 CBWD3Q5JTY5 395 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 CBWD5Q5RIA9 395 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 RIT2Q99578 217 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 GPR88Q9GZN0 384 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 PDGFDQ9GZP0 370 aaPredicted RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 GTPBP10A4D1E9 387 aaKnown RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 CES2O00748 559 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 FGGP02679 453 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 P4HBP07237 508 aaKnown RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 DPEP1P16444 411 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 ITGB5P18084 799 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 IFT88Q13099 833 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 UHMK1Q8TAS1 419 aaKnown RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 ARHGEF26Q96DR7 871 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 PBKQ96KB5 322 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 GMLQ99445 158 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 MKNK1Q9BUB5 465 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 BUB1BO60566 1050 aaPredicted RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 TNFAIP3P21580 790 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 MUTP22033 750 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 SOX5P35711 763 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 POU5F1Q01860 360 aaKnown RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 SNX1Q13596 522 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 MTMR1Q13613 665 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 FAM83AQ86UY5 434 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 SUGP1Q8IWZ8 645 aaKnown RBP14.01□□□□□ -0.17
COL12A1-205ENST00000425443 RASGEF1CQ8N431 466 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 SLC30A5Q8TAD4 765 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 JDP2Q8WYK2 163 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
COL12A1-205ENST00000425443 TBC1D12O60347 775 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 BYSLQ13895 437 aaKnown RBP14□□□□□ -0.17
COL12A1-205ENST00000425443 RASA3Q14644 834 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 RNF187Q5TA31 235 aaPredicted RBP14□□□□□ -0.17
COL12A1-205ENST00000425443 NSMFQ6X4W1 530 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 TMC3Q7Z5M5 1100 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 CTNNBL1Q8WYA6 563 aaPredicted RBP14□□□□□ -0.17
COL12A1-205ENST00000425443 MIEF2Q96C03 454 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 CYFIP2Q96F07 1278 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms