RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 HNRNPDLO14979 420 aaKnown RBP12.52□□□□□ -0.4
UBR4-207ENST00000425413 CYP26A1O43174 497 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 LMNB1P20700 586 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 JAK3P52333 1124 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 SMTNP53814 917 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 GTF2BQ00403 316 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 NFIL3Q16649 462 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 ZSCAN26Q16670 478 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.4
UBR4-207ENST00000425413 TMEM161BQ8NDZ6 487 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 SLC30A5Q8TAD4 765 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 NSUN6Q8TEA1 469 aaKnown RBP12.52□□□□□ -0.4
UBR4-207ENST00000425413 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.4
UBR4-207ENST00000425413 TRIM31Q9BZY9 425 aa12.52□□□□□ -0.4
UBR4-207ENST00000425413 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.4
UBR4-207ENST00000425413 ADGRA3Q8IWK6 1321 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 KRIT1O00522 736 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 FTLP02792 175 aaPredicted RBP12.52□□□□□ -0.41
UBR4-207ENST00000425413 ITIH3Q06033 890 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 AADACL2Q6P093 401 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 PHLDB2Q86SQ0 1253 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 TEX2Q8IWB9 1127 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.41
UBR4-207ENST00000425413 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.41
UBR4-207ENST00000425413 DSG3P32926 999 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 PRKCEQ02156 737 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 TTC19Q6DKK2 380 aaPredicted RBP12.51□□□□□ -0.41
UBR4-207ENST00000425413 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 GOLGA6L1Q8N7Z2 621 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 TMEM143Q96AN5 459 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 AGPAT1Q99943 283 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 CTTNBP2NLQ9P2B4 639 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 AMACRQ9UHK6 382 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 COG5Q9UP83 839 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 NR2E1Q9Y466 385 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 SFNP31947 248 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 EPHB4P54760 987 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 TNNC1P63316 161 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 NT5DC3Q86UY8 548 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 SLC47A2Q86VL8 602 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 CPNE8Q86YQ8 564 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 TAS1R2Q8TE23 839 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 FAM213AQ9BRX8 229 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
UBR4-207ENST00000425413 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
UBR4-207ENST00000425413 MED4Q9NPJ6 270 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 CYP39A1Q9NYL5 469 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 AMFRQ9UKV5 643 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 NENFQ9UMX5 172 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 PFASO15067 1338 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 PGRMC1O00264 195 aaKnown RBP12.51□□□□□ -0.41
UBR4-207ENST00000425413 FGGP02679 453 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 KCNA2P16389 499 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 HIRAP54198 1017 aaPredicted RBP12.51□□□□□ -0.41
UBR4-207ENST00000425413 ACTR2P61160 394 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 SP2Q02086 613 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 KCTD16Q68DU8 428 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 REPS2Q8NFH8 660 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 RFFLQ8WZ73 363 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 BTBD6Q96KE9 485 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 TEX13BQ9BXU2 312 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 MTFR1LQ9H019 292 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 VIPAS39Q9H9C1 493 aa12.51□□□□□ -0.41
UBR4-207ENST00000425413 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
UBR4-207ENST00000425413 FZD9O00144 591 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 LYPLA2O95372 231 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 KRT14P02533 472 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
UBR4-207ENST00000425413 SLC39A4Q6P5W5 647 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 RUFY1Q96T51 708 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 PCDHB18PQ96TA0 734 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 SLC9A2Q9UBY0 812 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 BTNL10A8MVZ5 291 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
UBR4-207ENST00000425413 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
UBR4-207ENST00000425413 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 NOP9Q86U38 636 aaKnown RBP12.5□□□□□ -0.41
UBR4-207ENST00000425413 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 TATDN2Q93075 761 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 DPH5Q9H2P9 285 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 XPNPEP1Q9NQW7 623 aa12.5□□□□□ -0.41
UBR4-207ENST00000425413 SPDYE16A6NNV3 312 aaPredicted RBP12.49□□□□□ -0.41
UBR4-207ENST00000425413 TMEM253P0C7T8 217 aa12.49□□□□□ -0.41
UBR4-207ENST00000425413 CCDC172P0C7W6 258 aa12.49□□□□□ -0.41
UBR4-207ENST00000425413 KRT5P13647 590 aa12.49□□□□□ -0.41
UBR4-207ENST00000425413 MARCKSL1P49006 195 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms