RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 BSNDQ8WZ55 320 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 BICD1Q96G01 975 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 DEFB118Q96PH6 123 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 MRPL4Q9BYD3 311 aaKnown RBP11.32□□□□□ -0.6
MDC1-205ENST00000425072 KIAA1586Q9HCI6 787 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
MDC1-205ENST00000425072 OGDHLQ9ULD0 1010 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 PHF24Q9UPV7 400 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 TRIP12Q14669 1992 aaPredicted RBP11.32□□□□□ -0.6
MDC1-205ENST00000425072 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 A0A0U1RQG5 324 aaPredicted RBP11.31□□□□□ -0.6
MDC1-205ENST00000425072 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 DLL1O00548 723 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 ACKR2O00590 384 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 TREHO43280 583 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 NR3C1P04150 777 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 GJB1P08034 283 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 NR2F2P24468 414 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 PSMC2P35998 433 aaKnown RBP11.31□□□□□ -0.6
MDC1-205ENST00000425072 LIG4P49917 911 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 GPC3P51654 580 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 FANCCQ00597 558 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 PPP2R3AQ06190 1150 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 KCNA1Q09470 495 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 DRP2Q13474 957 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 ZCWPW2Q504Y3 356 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 TCP11X2Q5H9J9 407 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 CDCA2Q69YH5 1023 aaPredicted RBP11.31□□□□□ -0.6
MDC1-205ENST00000425072 APBB1IPQ7Z5R6 666 aaPredicted RBP11.31□□□□□ -0.6
MDC1-205ENST00000425072 FRMD5Q7Z6J6 570 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 PRIMPOLQ96LW4 560 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 NLRP4Q96MN2 994 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 FZD8Q9H461 694 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 STARD7Q9NQZ5 370 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 LIMA1Q9UHB6 759 aaKnown RBP11.31□□□□□ -0.6
MDC1-205ENST00000425072 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
MDC1-205ENST00000425072 A0A087WZ62 844 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 ARVCFO00192 962 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 HNRNPDLO14979 420 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 N4BP3O15049 544 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 CLIC2O15247 247 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 MAPK13O15264 365 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 SLC16A3O15427 465 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 EXOC3O60645 756 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 PIGRP01833 764 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 EPB41P11171 864 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 CRYBB1P53674 252 aaPredicted RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 PTK7Q13308 1070 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 PRPF4BQ13523 1007 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 MTFR1Q15390 333 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 PTGISQ16647 500 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 USP37Q86T82 979 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 ZC3H3Q8IXZ2 948 aaKnown RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 SLC43A3Q8NBI5 491 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 ZNF333Q96JL9 665 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 FDXACB1Q9BRP7 624 aaPredicted RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 TCHPQ9BT92 498 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
MDC1-205ENST00000425072 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 AGPAT3Q9NRZ7 376 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 STYXL1Q9Y6J8 313 aa11.3□□□□□ -0.6
MDC1-205ENST00000425072 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
MDC1-205ENST00000425072 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 CLDN3O15551 220 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 CAND2O75155 1236 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 GPR32O75388 356 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 TOM1L1O75674 476 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 ADCY5O95622 1261 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 VTNP04004 478 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 PRKCBP05771 671 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 KRT13P13646 458 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 AXLP30530 894 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 MATR3P43243 847 aaKnown RBP eCLIP11.29□□□□□ -0.6
MDC1-205ENST00000425072 MARSP56192 900 aaKnown RBP11.29□□□□□ -0.6
MDC1-205ENST00000425072 ZNF200P98182 395 aaPredicted RBP11.29□□□□□ -0.6
MDC1-205ENST00000425072 NR1I3Q14994 352 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 KYAT1Q16773 422 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms