RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 GIT1Q9Y2X7 761 aa3.38□□□□□ -1.87
PMS1-209ENST00000424059 ANKRD18BA2A2Z9 1011 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 FOXP2O15409 715 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 HTATSF1O43719 755 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 KIF5CO60282 957 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 VIL1P09327 827 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 NBPF7P0C2Y1 421 aaPredicted RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 MAKP20794 623 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 RRM1P23921 792 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 MSX2P35548 267 aaPredicted RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 MAGEA8P43361 318 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 POU5F1BQ06416 359 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 CCDC15Q0P6D6 951 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 MOGSQ13724 837 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 TUBA3CQ13748 450 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 MAPRE1Q15691 268 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 TBR1Q16650 682 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 TRIM61Q5EBN2 209 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 SOGA3Q5TF21 947 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 TUBA3EQ6PEY2 450 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 SPATC1Q76KD6 591 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 OTUD6AQ7L8S5 288 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 FMNL3Q8IVF7 1028 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 NOSTRINQ8IVI9 506 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 ZC3H7AQ8IWR0 971 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 LMNTD2Q8IXW0 634 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 ANKRD35Q8N283 1001 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 KIAA1958Q8N8K9 716 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 GSTCDQ8NEC7 633 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 MNS1Q8NEH6 495 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 IL17DQ8TAD2 202 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 TAF4BQ92750 862 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 DLG3Q92796 817 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 KIAA1683Q9H0B3 1180 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 TLR9Q9NR96 1032 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 HOXC10Q9NYD6 342 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 ACAD8Q9UKU7 415 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 THRAP3Q9Y2W1 955 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 PCDHA8Q9Y5H6 950 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 COL4A3BPQ9Y5P4 624 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 CFAP65Q6ZU64 1925 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 PRC1O43663 620 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 APEX1P27695 318 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 MC4RP32245 332 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 ADCY8P40145 1251 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 CD83Q01151 205 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 FOXL1Q12952 345 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 UBE4AQ14139 1066 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 CCDC144BQ3MJ40 725 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 MAP9Q49MG5 647 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 FAM209AQ5JX71 171 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 UBE2Q1Q7Z7E8 422 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 TMPRSS6Q8IU80 811 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 ELOA2Q8IYF1 753 aaPredicted RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 D2HGDHQ8N465 521 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 SHCBP1Q8NEM2 672 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 SMCR8Q8TEV9 937 aaPredicted RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 RABGGTAQ92696 567 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 GOLGA1Q92805 767 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 CEP89Q96ST8 783 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 PRRX2Q99811 253 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 FOXB1Q99853 325 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 PARPBPQ9NWS1 579 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 RABL2BQ9UNT1 228 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 MRPS23Q9Y3D9 190 aaKnown RBP3.37□□□□□ -1.87
PMS1-209ENST00000424059 B3GALT1Q9Y5Z6 326 aa3.37□□□□□ -1.87
PMS1-209ENST00000424059 SLC12A8A0AV02 714 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 PLSCR1O15162 318 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 CRTAMO95727 393 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 MMEP08473 750 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 C1SP09871 688 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 SRGAP2CP0DJJ0 459 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 HIBADHP31937 336 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 FNTBP49356 437 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 DNM2P50570 870 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 GRM7Q14831 915 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 LRCH2Q5VUJ6 765 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 KLHDC10Q6PID8 442 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 GPR135Q8IZ08 494 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 ASB15Q8WXK1 588 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 GFM2Q969S9 779 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 RUNDC1Q96C34 613 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 EXOC2Q96KP1 924 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 NAP1L4Q99733 375 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 MRPL4Q9BYD3 311 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 PCDH12Q9NPG4 1184 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 C11orf21Q9P2W6 132 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 KNSTRNQ9Y448 316 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 CHL1O00533 1208 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 PPFIA2O75334 1257 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 H2AFYO75367 372 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 RBP3P10745 1247 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 IBSPP21815 317 aaPredicted RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 HOXD10P28358 340 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 SIM2Q14190 667 aaPredicted RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 DCTN1Q14203 1278 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 BMS1Q14692 1282 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 NOLC1Q14978 699 aaKnown RBP eCLIP3.36□□□□□ -1.87
PMS1-209ENST00000424059 FOXB2Q5VYV0 432 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 SGMS1Q86VZ5 419 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms