RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 XIRP2A4UGR9 3374 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 LRRIQ4A6NIV6 560 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 FSCN2O14926 492 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 SLC26A4O43511 780 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 USO1O60763 962 aaKnown RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 ZC3H11AO75152 810 aaKnown RBP eCLIP9.58□□□□□ -0.88
MDC1-204ENST00000422266 OFD1O75665 1012 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 EYA4O95677 639 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 ALDH2P05091 517 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 ITGA4P13612 1032 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 CYP11B2P19099 503 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 HOXA11P31270 313 aaPredicted RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 CCT6AP40227 531 aaKnown RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 NAMPTP43490 491 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 NRIP1P48552 1158 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 EFNA5P52803 228 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 BCAR1P56945 870 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 COASYQ13057 564 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 PTGDRQ13258 359 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 SMAD2Q15796 467 aaKnown RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 MAPK6Q16659 721 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 DUSP6Q16828 381 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 FAM187BQ17R55 369 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 TPRNQ4KMQ1 711 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 ARL6IP4Q66PJ3 421 aaKnown RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 SLC27A1Q6PCB7 646 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 TMEM184AQ6ZMB5 413 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 PPFIBP1Q86W92 1011 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 ADHFE1Q8IWW8 467 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 GJD3Q8N144 294 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 SLC39A11Q8N1S5 342 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 IGSF22Q8N9C0 903 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 ZNF579Q8NAF0 562 aaKnown RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 CASP10Q92851 521 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 POLR3FQ9H1D9 316 aaPredicted RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 C17orf75Q9HAS0 396 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 XPNPEP1Q9NQW7 623 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 BMP2KQ9NSY1 1161 aaPredicted RBP9.58□□□□□ -0.88
MDC1-204ENST00000422266 RNF19AQ9NV58 838 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 DPP7Q9UHL4 492 aa9.58□□□□□ -0.88
MDC1-204ENST00000422266 N4BP3O15049 544 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 ZBTB39O15060 712 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 TSPAN1O60635 241 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 DTNBO60941 627 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 MED24O75448 989 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 GLRA2P23416 452 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 DNAJB1P25685 340 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 GJB2P29033 226 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 MBTD1Q05BQ5 628 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 CAPSQ13938 189 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
MDC1-204ENST00000422266 PADI6Q6TGC4 694 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 LRRC55Q6ZSA7 311 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 BRAPQ7Z569 592 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 DDX53Q86TM3 631 aaKnown RBP9.57□□□□□ -0.88
MDC1-204ENST00000422266 MRPL43Q8N983 215 aaKnown RBP9.57□□□□□ -0.88
MDC1-204ENST00000422266 SMRP1Q8NCR6 262 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 DEPTORQ8TB45 409 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 SNX29Q8TEQ0 813 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 IGSF21Q96ID5 467 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 AK8Q96MA6 479 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 MINDY3Q9H8M7 445 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 TBC1D13Q9NVG8 400 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 KCND2Q9NZV8 630 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 INPP5FQ9Y2H2 1132 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 FAN1Q9Y2M0 1017 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 IRAK3Q9Y616 596 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 MYO7AQ13402 2215 aa9.57□□□□□ -0.88
MDC1-204ENST00000422266 SPTBN5Q9NRC6 3674 aaKnown RBP9.56□□□□□ -0.88
MDC1-204ENST00000422266 TCF20Q9UGU0 1960 aaKnown RBP9.56□□□□□ -0.88
MDC1-204ENST00000422266 A0A1B0GUA9 196 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 WNT7AO00755 349 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 INPPL1O15357 1258 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 MBTPS2O43462 519 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 CSPG5O95196 566 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 GALTP07902 379 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 PDIA4P13667 645 aaKnown RBP9.56□□□□□ -0.88
MDC1-204ENST00000422266 IL9P15248 144 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 SCP2P22307 547 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 IRS1P35568 1242 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 LTBRP36941 435 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 ERVFC1P60507 584 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 ITIH3Q06033 890 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 PLPP4Q5VZY2 271 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
MDC1-204ENST00000422266 POTEGQ6S5H5 508 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 AGMOQ6ZNB7 445 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 RBM23Q86U06 439 aaKnown RBP9.56□□□□□ -0.88
MDC1-204ENST00000422266 VPS52Q8N1B4 723 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 C4orf32Q8N8J7 132 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 CDK5RAP3Q96JB5 506 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 MSLNLQ96KJ4 702 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 DRC1Q96MC2 740 aa9.56□□□□□ -0.88
MDC1-204ENST00000422266 RPS6KC1Q96S38 1066 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms