RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 DNAJB4Q9UDY4 337 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 CNTNAP2Q9UHC6 1331 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 B4GALT3O60512 393 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 JAK2O60674 1132 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 NCLP19338 710 aaKnown RBP21.08■□□□□ 0.97
VARS2-202ENST00000421263 AFF1P51825 1210 aaKnown RBP21.08■□□□□ 0.97
VARS2-202ENST00000421263 PTENP60484 403 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 ZXDAP98168 799 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 ST3GAL1Q11201 340 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 GIT2Q14161 759 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 MXD4Q14582 209 aaPredicted RBP21.08■□□□□ 0.97
VARS2-202ENST00000421263 DIS3L2Q8IYB7 885 aaKnown RBP21.08■□□□□ 0.97
VARS2-202ENST00000421263 BCL7CQ8WUZ0 217 aaPredicted RBP21.08■□□□□ 0.97
VARS2-202ENST00000421263 BMP2KQ9NSY1 1161 aaPredicted RBP21.08■□□□□ 0.97
VARS2-202ENST00000421263 ANKEF1Q9NU02 776 aa21.08■□□□□ 0.97
VARS2-202ENST00000421263 MUC6Q6W4X9 2439 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 ARID2Q68CP9 1835 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 DDHD2O94830 711 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 SEC24BO95487 1268 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 XRCC6P12956 609 aaKnown RBP eCLIP21.07■□□□□ 0.96
VARS2-202ENST00000421263 SLC11A1P49279 550 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 RNASELQ05823 741 aaKnown RBP21.07■□□□□ 0.96
VARS2-202ENST00000421263 CALCRLQ16602 461 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 TPRNQ4KMQ1 711 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 TRIM67Q6ZTA4 783 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 CNNM3Q8NE01 707 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 MFSD14AQ96MC6 490 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 RSAD1Q9HA92 442 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 KANSL3Q9P2N6 904 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 INPP5FQ9Y2H2 1132 aa21.07■□□□□ 0.96
VARS2-202ENST00000421263 NEMFO60524 1076 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 DGAT1O75907 488 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 AXLP30530 894 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 ARL2P36404 184 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 TXKP42681 527 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 ITIH3Q06033 890 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 SMG8Q8ND04 991 aaKnown RBP21.06■□□□□ 0.96
VARS2-202ENST00000421263 SLC22A17Q8WUG5 538 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 TMEM175Q9BSA9 504 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 APOL5Q9BWW9 433 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 VN1R3Q9BXE9 311 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 ZNF318Q5VUA4 2279 aa21.06■□□□□ 0.96
VARS2-202ENST00000421263 INPPL1O15357 1258 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 TSPAN1O60635 241 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 ALDH2P05091 517 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 RARRES1P49788 294 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 URGCPQ8TCY9 931 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 AUTS2Q8WXX7 1259 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 NFKBIZQ9BYH8 718 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 GBP3Q9H0R5 595 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 UBN1Q9NPG3 1134 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 STK39Q9UEW8 545 aa21.05■□□□□ 0.96
VARS2-202ENST00000421263 TMEM221A6NGB7 291 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 M0R296 226 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 TRIM29Q14134 588 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 AMHR2Q16671 573 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 CCDC51Q96ER9 411 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 FBXL18Q96ME1 805 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 NECTIN4Q96NY8 510 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 TMEM60Q9H2L4 133 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 IPPQ9Y573 584 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 WDFY4Q6ZS81 3184 aa21.04■□□□□ 0.96
VARS2-202ENST00000421263 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.03■□□□□ 0.96
VARS2-202ENST00000421263 NRP1O14786 923 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 LILRB3O75022 631 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 ERLIN2O94905 339 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 SPATA31C1P0DKV0 1188 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 GLRA2P23416 452 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 MBTD1Q05BQ5 628 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 CAPSQ13938 189 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 TFDP1Q14186 410 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 PTPN14Q15678 1187 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 CES5AQ6NT32 575 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 ASAP3Q8TDY4 903 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 EIF2AQ9BY44 585 aaKnown RBP21.03■□□□□ 0.96
VARS2-202ENST00000421263 CSRNP2Q9H175 543 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 RNF39Q9H2S5 420 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 POMKQ9H5K3 350 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 CDH22Q9UJ99 828 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 LIMCH1Q9UPQ0 1083 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 FAN1Q9Y2M0 1017 aa21.03■□□□□ 0.96
VARS2-202ENST00000421263 EFEMP2O95967 443 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 POMCP01189 267 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 ITGA4P13612 1032 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 EPCAMP16422 314 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 MTHFRP42898 656 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 SIGLEC14Q08ET2 396 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 PTPN21Q16825 1174 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 NOTUMQ6P988 496 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 PIGOQ8TEQ8 1089 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 FAM193BQ96PV7 902 aaPredicted RBP21.02■□□□□ 0.96
VARS2-202ENST00000421263 DZANK1Q9NVP4 752 aa21.02■□□□□ 0.96
VARS2-202ENST00000421263 A0A087WWV3 80 aa21.01■□□□□ 0.95
VARS2-202ENST00000421263 POTEMA6NI47 508 aa21.01■□□□□ 0.95
VARS2-202ENST00000421263 INO80B-WBP1J3KQ70 363 aa21.01■□□□□ 0.95
VARS2-202ENST00000421263 ARF4P18085 180 aaPredicted RBP21.01■□□□□ 0.95
VARS2-202ENST00000421263 CA8P35219 290 aa21.01■□□□□ 0.95
VARS2-202ENST00000421263 FOSBP53539 338 aa21.01■□□□□ 0.95
VARS2-202ENST00000421263 NCBP1Q09161 790 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms