RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 NCAPG2Q86XI2 1143 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 CCDC60Q8IWA6 550 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 METTL13Q8N6R0 699 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 ZNF668Q96K58 619 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 CENPHQ9H3R5 247 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 FAM204AQ9H8W3 233 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 JPH1Q9HDC5 661 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 DBR1Q9UK59 544 aaKnown RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 HPCAL4Q9UM19 191 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TBX20Q9UMR3 447 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 GTPBP10A4D1E9 387 aaKnown RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 GOLGA6BA6NDN3 693 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 PRKCIP41743 596 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 HIRAP54198 1017 aaPredicted RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 DDX42Q86XP3 938 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDX56-203ENST00000421223 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 RUFY1Q96T51 708 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 TMEM117Q9H0C3 514 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 LRRIQ4A6NIV6 560 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 KRIT1O00522 736 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 RGS20O76081 388 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 SGPL1O95470 568 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 FTLP02792 175 aaPredicted RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 CAPN2P17655 700 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 LMNB1P20700 586 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 ADSSP30520 456 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 SFNP31947 248 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 ACTR2P61160 394 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 PRKCEQ02156 737 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 SEZ6Q53EL9 994 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 NIPA1Q7RTP0 329 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 LMBR1Q8WVP7 490 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
DDX56-203ENST00000421223 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 KLRG1Q96E93 195 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 ACAD9Q9H845 621 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 AMFRQ9UKV5 643 aa11.85□□□□□ -0.51
DDX56-203ENST00000421223 FZD9O00144 591 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 FAM153BP0C7A2 387 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 CCDC172P0C7W6 258 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 ITGA4P13612 1032 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 FAM153CQ494X1 144 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 C10orf76Q5T2E6 689 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 FAM153AQ9UHL3 310 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 ZNF646O15015 1829 aaPredicted RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 RAD51CO43502 376 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 PSAPP07602 524 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 ACOT2P49753 483 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 SP2Q02086 613 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 MESDQ14696 234 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 TTC19Q6DKK2 380 aaPredicted RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 MOB2Q70IA6 237 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 APOBEC3FQ8IUX4 373 aaKnown RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 IFT20Q8IY31 132 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 TMEM161BQ8NDZ6 487 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 SEMA4DQ92854 862 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 AGPAT1Q99943 283 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 POLR3FQ9H1D9 316 aaPredicted RBP11.84□□□□□ -0.51
DDX56-203ENST00000421223 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 CCDC66A2RUB6 948 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 TNNI1P19237 187 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 MARK3P27448 753 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 TNNC1P63316 161 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 GTF2BQ00403 316 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 GNPTABQ3T906 1256 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 KCTD16Q68DU8 428 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 SLC47A2Q86VL8 602 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 SLC30A5Q8TAD4 765 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 TAS1R2Q8TE23 839 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 IFT74Q96LB3 600 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 GPR88Q9GZN0 384 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 ANKFY1Q9P2R3 1169 aa11.84□□□□□ -0.51
DDX56-203ENST00000421223 UBE4BO95155 1302 aa11.83□□□□□ -0.51
DDX56-203ENST00000421223 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
DDX56-203ENST00000421223 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 FGGP02679 453 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
DDX56-203ENST00000421223 BIRC3Q13489 604 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 C2CD6Q53TS8 623 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 AADACL2Q6P093 401 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 CATSPERGQ6ZRH7 1159 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 TSEN2Q8NCE0 465 aaKnown RBP11.83□□□□□ -0.52
DDX56-203ENST00000421223 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 BTBD6Q96KE9 485 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 INPP4AQ96PE3 977 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms