RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 CNTNAP2Q9UHC6 1331 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 A0A0U1RQF3 1178 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 GOLGA6L4A6NEF3 574 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 ACKR2O00590 384 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 ACTN4O43707 911 aaKnown RBP22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 SLFN14P0C7P3 912 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 LIG1P18858 919 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 IBSPP21815 317 aaPredicted RBP22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 SYKP43405 635 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 NDUFA8P51970 172 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 HTRA4P83105 476 aaPredicted RBP22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 AMPD3Q01432 767 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 CSPP1Q1MSJ5 1256 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 NOTUMQ6P988 496 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 CEP57L1Q8IYX8 460 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 TMEM161BQ8NDZ6 487 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 CCDC51Q96ER9 411 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 CPB2Q96IY4 423 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 TMEM134Q9H6X4 195 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 ELAC1Q9H777 363 aaKnown RBP22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 TMEM161AQ9NX61 479 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 USP25Q9UHP3 1055 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 SERTAD1Q9UHV2 236 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 LRFN2Q9ULH4 789 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 INSL6Q9Y581 213 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 COL4A6Q14031 1691 aa22.74■■□□□ 1.23
HMGXB4-203ENST00000420166 FNDC1Q4ZHG4 1894 aaPredicted RBP22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 H0YCG3 227 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 K7ERI5 159 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 NCKAP1LP55160 1127 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 PRPF4BQ13523 1007 aaKnown RBP22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 UBXN11Q5T124 520 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 TAS1R3Q7RTX0 852 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 TIFAQ96CG3 184 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 YME1L1Q96TA2 773 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 TRIM9Q9C026 710 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 NKX2-4Q9H2Z4 354 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 FAM105AQ9NUU6 356 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 PCDHB7Q9Y5E2 793 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 MYO9BQ13459 2157 aa22.73■■□□□ 1.23
HMGXB4-203ENST00000420166 TTLL13PA6NNM8 815 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 TRAK2O60296 914 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 EDN1P05305 212 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 MAPTP10636 758 aaKnown RBP22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 SKIP12755 728 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 IDEP14735 1019 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 ATF7P17544 494 aaPredicted RBP22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 GAP43P17677 238 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 RAB27AP51159 221 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 CNNM4Q6P4Q7 775 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 ZNF598Q86UK7 904 aaKnown RBP22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 SFR1Q86XK3 245 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 FIZ1Q96SL8 496 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 RC3H2Q9HBD1 1191 aaKnown RBP22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 SEL1LQ9UBV2 794 aa22.72■■□□□ 1.23
HMGXB4-203ENST00000420166 A0A1B0GUA9 196 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 FRMD3A2A2Y4 597 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 LCHNA4D1U4 455 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 K7ENM7 598 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 DGKIO75912 1065 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 CA3P07451 260 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 LONRF3Q496Y0 759 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 GPR153Q6NV75 609 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 HAUS6Q7Z4H7 955 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 FAM178BQ8IXR5 827 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 TMEM87AQ8NBN3 555 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 SP7Q8TDD2 431 aaPredicted RBP22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 KCNN1Q92952 543 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 C7orf25Q9BPX7 421 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 USP20Q9Y2K6 914 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 PCDHB2Q9Y5E7 798 aa22.71■■□□□ 1.23
HMGXB4-203ENST00000420166 TMEM265A0A087WTH1 108 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 N4BP3O15049 544 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 ZNF623O75123 536 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 EOMESO95936 686 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 SCP2P22307 547 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 AFMP43652 599 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 ASIC1P78348 528 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 TMEM132AQ24JP5 1023 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 NT5DC1Q5TFE4 455 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 SLC27A1Q6PCB7 646 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 GRAMD1CQ8IYS0 662 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 RNF169Q8NCN4 708 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 ZNF689Q96CS4 500 aaPredicted RBP22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 EIF2AQ9BY44 585 aaKnown RBP22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 PDZD7Q9H5P4 517 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 RNF19AQ9NV58 838 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 PANK4Q9NVE7 773 aa22.7■■□□□ 1.22
HMGXB4-203ENST00000420166 ARHGEF15O94989 841 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 FGFR1P11362 822 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 NMT1P30419 496 aaKnown RBP22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 STRN3Q13033 797 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 ATF7IP2Q5U623 682 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 CDR2LQ86X02 465 aaPredicted RBP22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 CCDC65Q8IXS2 484 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 SLC17A8Q8NDX2 589 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 PAGE5Q96GU1 130 aa22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 MRPL4Q9BYD3 311 aaKnown RBP22.69■■□□□ 1.22
HMGXB4-203ENST00000420166 ST6GALNAC4Q9H4F1 302 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms