RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 UTP6Q9NYH9 597 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SIK3Q9Y2K2 1263 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TMED5Q9Y3A6 229 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 MYH7BA7E2Y1 1941 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 NWD2Q9ULI1 1742 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM120BA0PK00 339 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CAPN9O14815 690 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ZFYP08048 801 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TROVE2P10155 538 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ITGA4P13612 1032 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SMARCA1P28370 1054 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 YARSP54577 528 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 AUHQ13825 339 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 MTFR1Q15390 333 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CERKLQ49MI3 558 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ZCWPW2Q504Y3 356 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM67Q5HYA8 995 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CFAP157Q5JU67 520 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 MEX3CQ5U5Q3 659 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SYDE2Q5VT97 1194 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CCDC84Q86UT8 332 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TBC1D10CQ8IV04 446 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TEKT1Q969V4 418 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 DYDC2Q96IM9 177 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 MAML3Q96JK9 1138 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TGS1Q96RS0 853 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SIKE1Q9BRV8 207 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TRIM31Q9BZY9 425 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 MMRN2Q9H8L6 949 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 METTL14Q9HCE5 456 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 NLRC4Q9NPP4 1024 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ZDHHC18Q9NUE0 388 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ARHGEF38Q9NXL2 777 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 STK32BQ9NY57 414 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SUCLA2Q9P2R7 463 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 V9GY48 417 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SMIM31A0A1B0GVY4 71 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 NEURL1BA8MQ27 555 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 B4E1Z4 1266 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 BTBD19C9JJ37 291 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 RASGRF2O14827 1237 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 BIRC5O15392 142 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 TBX10O75333 385 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 KRT36O76013 467 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 RGS20O76081 388 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ASMTLO95671 621 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 RGS2P41220 211 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 SLC19A1P41440 591 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 LIFRP42702 1097 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 MTTPP55157 894 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 SH3BP2P78314 561 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ATP2C1P98194 919 aaPredicted RBP6.85□□□□□ -1.31
CCNT1-202ENST00000417344 NEXNQ0ZGT2 675 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 AIMP1Q12904 312 aaKnown RBP6.85□□□□□ -1.31
CCNT1-202ENST00000417344 GCKRQ14397 625 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF174Q15697 407 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCNT1-202ENST00000417344 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 EARS2Q5JPH6 523 aaKnown RBP6.85□□□□□ -1.31
CCNT1-202ENST00000417344 MFSD5Q6N075 450 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM53Q6P2H8 277 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF449Q6P9G9 518 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 NELFCDQ8IXH7 590 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 KBTBD2Q8IY47 623 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ERMNQ8TAM6 284 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 P2RX5Q93086 422 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 TRIM51Q9BSJ1 452 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 NACA2Q9H009 215 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 TLE6Q9H808 572 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 KRT82Q9NSB4 513 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 PTTG2Q9NZH5 202 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 TBC1D7Q9P0N9 293 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF212Q9UDV6 495 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 DBR1Q9UK59 544 aaKnown RBP6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF148Q9UQR1 794 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 CHKBQ9Y259 395 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 R3HDM2Q9Y2K5 976 aaKnown RBP6.85□□□□□ -1.31
CCNT1-202ENST00000417344 ECM29Q5VYK3 1845 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 UMODL1Q5DID0 1318 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 RPTORQ8N122 1335 aa6.85□□□□□ -1.31
CCNT1-202ENST00000417344 HTR3EA5X5Y0 456 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 BTBD11A6QL63 1104 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 WNT7AO00755 349 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 NKRFO15226 690 aaKnown RBP eCLIP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 MAPK13O15264 365 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 P4HA2O15460 535 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DCTN3O75935 186 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PSMG1O95456 288 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 SERPING1P05155 500 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 T-ENOLP0DO92 83 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PORP16435 677 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CCNE1P24864 410 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PTPN4P29074 926 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 KRT2P35908 639 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 NEK3P51956 506 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TIMM10P62072 90 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms