RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZHX3Q9H4I2 956 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 TMEM134Q9H6X4 195 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 GDPD2Q9HCC8 539 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 MICAL3Q7RTP6 2002 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 ACKR2O00590 384 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 HOXA2O43364 376 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 DGKIO75912 1065 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 PRKCBP05771 671 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 CA3P07451 260 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 LIG1P18858 919 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 PRPF4BQ13523 1007 aaKnown RBP25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 AMHR2Q16671 573 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 TMEM132AQ24JP5 1023 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 DYMQ7RTS9 669 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 KIFC3Q9BVG8 833 aa25.45■■□□□ 1.66
SMARCB1-205ENST00000417137 MYMKA6NI61 221 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 ARF4P18085 180 aaPredicted RBP25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 ZNF131P52739 623 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 PPP2R2DQ66LE6 453 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 CEP57L1Q8IYX8 460 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 CNNM3Q8NE01 707 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 PGBD4Q96DM1 585 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 CCDC113Q9H0I3 377 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 ZNF576Q9H609 170 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 FAM105AQ9NUU6 356 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 KBTBD4Q9NVX7 518 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 ARHGAP28Q9P2N2 729 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 USP25Q9UHP3 1055 aa25.44■■□□□ 1.66
SMARCB1-205ENST00000417137 A0A1B0GUA9 196 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 A0A1B0GVL5 298 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 SLC16A4O15374 487 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 ZNF623O75123 536 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 PFKFB1P16118 471 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 ABCD1P33897 745 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 STRN3Q13033 797 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 RNF169Q8NCN4 708 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 CPB2Q96IY4 423 aa25.43■■□□□ 1.66
SMARCB1-205ENST00000417137 ADGRA3Q8IWK6 1321 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 CNTNAP2Q9UHC6 1331 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 B4GALT5O43286 388 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 TRAK2O60296 914 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 GAP43P17677 238 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 APBB1IPQ7Z5R6 666 aaPredicted RBP25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 SP7Q8TDD2 431 aaPredicted RBP25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 MRPS27Q92552 414 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 ZNF689Q96CS4 500 aaPredicted RBP25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 TRIM6Q9C030 488 aaPredicted RBP25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 SEMA6BQ9H3T3 888 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 SEL1LQ9UBV2 794 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 PCDHB2Q9Y5E7 798 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 COL6A3P12111 3177 aa25.42■■□□□ 1.66
SMARCB1-205ENST00000417137 N4BP3O15049 544 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 SLFN14P0C7P3 912 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 SYKP43405 635 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 BTG3Q14201 252 aaPredicted RBP25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 SLC27A1Q6PCB7 646 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 FAM178BQ8IXR5 827 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 CMTR2Q8IYT2 770 aaKnown RBP25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 HACE1Q8IYU2 909 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 ABI1Q8IZP0 508 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 FIBCD1Q8N539 461 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 FSIP1Q8NA03 581 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 TMEM161BQ8NDZ6 487 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 RSPH1Q8WYR4 309 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 DNAJC19Q96DA6 116 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 ADPGKQ9BRR6 497 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 HPSEQ9Y251 543 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 STXBP5LQ9Y2K9 1186 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 TTC3P53804 2025 aa25.41■■□□□ 1.66
SMARCB1-205ENST00000417137 FAM237AA0A1B0GTK4 181 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 LCHNA4D1U4 455 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 IDEP14735 1019 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 NCKAP1LP55160 1127 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 TPRNQ4KMQ1 711 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 UBXN11Q5T124 520 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 HAUS6Q7Z4H7 955 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 MRPL10Q7Z7H8 261 aaKnown RBP25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 ZNF598Q86UK7 904 aaKnown RBP25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 CCDC65Q8IXS2 484 aa25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 MRPL4Q9BYD3 311 aaKnown RBP25.4■■□□□ 1.66
SMARCB1-205ENST00000417137 LINC01553A4QN01 128 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 MAPTP10636 758 aaKnown RBP25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 TAP1Q03518 808 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 STAMQ92783 540 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 KCNN1Q92952 543 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 TGS1Q96RS0 853 aaKnown RBP25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 C7orf25Q9BPX7 421 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 TMEM117Q9H0C3 514 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 RC3H2Q9HBD1 1191 aaKnown RBP25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 UBN1Q9NPG3 1134 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 PANK4Q9NVE7 773 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 SERTAD1Q9UHV2 236 aa25.39■■□□□ 1.66
SMARCB1-205ENST00000417137 TBKBP1A7MCY6 615 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 K7ENM7 598 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 FGFR1P11362 822 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 NDUFA8P51970 172 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 HERC4Q5GLZ8 1057 aaPredicted RBP25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 ATF7IP2Q5U623 682 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 CNNM4Q6P4Q7 775 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 CCDC34Q96HJ3 373 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms