RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ADH1AP07327 375 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 CNPP09543 421 aaKnown RBP11.24□□□□□ -0.61
MDC1-202ENST00000416571 CPA1P15085 419 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 AK2P54819 239 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 COL9A2Q14055 689 aaPredicted RBP11.24□□□□□ -0.61
MDC1-202ENST00000416571 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 KSR1Q8IVT5 923 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 DTWD2Q8NBA8 298 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 TBCKQ8TEA7 893 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 GJA10Q969M2 543 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 JAKMIP1Q96N16 626 aaKnown RBP11.24□□□□□ -0.61
MDC1-202ENST00000416571 TMEM175Q9BSA9 504 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 MAN1C1Q9NR34 630 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 AGPAT5Q9NUQ2 364 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 COL4A3BPQ9Y5P4 624 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 CNTNAP2Q9UHC6 1331 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 NID2Q14112 1375 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 DKC1O60832 514 aaKnown RBP eCLIP11.23□□□□□ -0.61
MDC1-202ENST00000416571 DDHD2O94830 711 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 POMCP01189 267 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 SOD2P04179 222 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 CFHP08603 1231 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 NPR3P17342 541 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 PSMC5P62195 406 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 Q4G0T1 1027 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
MDC1-202ENST00000416571 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
MDC1-202ENST00000416571 PRG3Q9Y2Y8 225 aaPredicted RBP11.23□□□□□ -0.61
MDC1-202ENST00000416571 NRP1O14786 923 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 INPPL1O15357 1258 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 NARSO43776 548 aaKnown RBP11.22□□□□□ -0.61
MDC1-202ENST00000416571 B4GALT3O60512 393 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CLUHO75153 1309 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CDC45O75419 566 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 NR1I2O75469 434 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 TDP2O95551 362 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 GLUD1P00367 558 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 SRGAP2CP0DJJ0 459 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 IFNAR1P17181 557 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 OR1G1P47890 313 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 PLA2G4FQ68DD2 849 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CYP26C1Q6V0L0 522 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 AGMOQ6ZNB7 445 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 ANO5Q75V66 913 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CNNM3Q8NE01 707 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
MDC1-202ENST00000416571 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 PSPC1Q8WXF1 523 aaKnown RBP11.22□□□□□ -0.61
MDC1-202ENST00000416571 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CEP89Q96ST8 783 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 SEMA4AQ9H3S1 761 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 PIDD1Q9HB75 910 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 WNT16Q9UBV4 365 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 PCDHA4Q9UN74 947 aa11.22□□□□□ -0.61
MDC1-202ENST00000416571 CCDC195A0A1B0GUA6 201 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 EDIL3O43854 480 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 ERLIN2O94905 339 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 STBD1O95210 358 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 LMNAP02545 664 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 ITGA4P13612 1032 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 PSMA5P28066 241 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 GLUD2P49448 558 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 CCT2P78371 535 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 SSRP1Q08945 709 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 NTRK3Q16288 839 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 MOXD1Q6UVY6 613 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 MRPL10Q7Z7H8 261 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 PRPF31Q8WWY3 499 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 CEP170P1Q96L14 293 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 HERC2P3Q9BVR0 1158 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 IFT122Q9HBG6 1241 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 WDR6Q9NNW5 1121 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 DDX25Q9UHL0 483 aaKnown RBP11.21□□□□□ -0.61
MDC1-202ENST00000416571 CA14Q9ULX7 337 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 PPME1Q9Y570 386 aa11.21□□□□□ -0.61
MDC1-202ENST00000416571 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
MDC1-202ENST00000416571 ANKRD11Q6UB99 2663 aaPredicted RBP11.21□□□□□ -0.62
MDC1-202ENST00000416571 NCOR2Q9Y618 2525 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 DNAH14Q0VDD8 3507 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 CYP3A7-CYP3A51PA0A087WV96 503 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 CPLX1O14810 134 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 TEX28O15482 410 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 LILRB3O75022 631 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 RFPL2O75678 378 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 MYBP10242 640 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 SRFP11831 508 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 NCLP19338 710 aaKnown RBP11.2□□□□□ -0.62
MDC1-202ENST00000416571 RPS6KB1P23443 525 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 CYP3A7P24462 503 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 RFC5P40937 340 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms