RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ARL2P36404 184 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 RAB27AP51159 221 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 MBTD1Q05BQ5 628 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 POTEGQ6S5H5 508 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 CATSPER3Q86XQ3 398 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 ZNF280BQ86YH2 543 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 SMG8Q8ND04 991 aaKnown RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 CPB2Q96IY4 423 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 POLR3FQ9H1D9 316 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 SH2B1Q9NRF2 756 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 PRKAG3Q9UGI9 489 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 CDH22Q9UJ99 828 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 USP15Q9Y4E8 981 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 B4GALT5O43286 388 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 DGAT1O75907 488 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 OR52Z1P0C646 297 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 SLC11A1P49279 550 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 TOB1P50616 345 aaPredicted RBP16.81■□□□□ 0.28
UBXN4-203ENST00000416538 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
UBXN4-203ENST00000416538 SAFBQ15424 915 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBXN4-203ENST00000416538 ECM1Q16610 540 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 NOMO2Q5JPE7 1267 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 TTC38Q5R3I4 469 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 GLB1LQ6UWU2 654 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 MRPL10Q7Z7H8 261 aaKnown RBP16.81■□□□□ 0.28
UBXN4-203ENST00000416538 NOSTRINQ8IVI9 506 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 C4orf32Q8N8J7 132 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 FEZF2Q8TBJ5 459 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 AUTS2Q8WXX7 1259 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 BSNDQ8WZ55 320 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
UBXN4-203ENST00000416538 C1QTNF1Q9BXJ1 281 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 HES2Q9Y543 173 aa16.81■□□□□ 0.28
UBXN4-203ENST00000416538 C2orf71A6NGG8 1288 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 DDHD2O94830 711 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 GALTP07902 379 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 TECP42680 631 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
UBXN4-203ENST00000416538 SYCE2Q6PIF2 218 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 CDR2LQ86X02 465 aaPredicted RBP16.8■□□□□ 0.28
UBXN4-203ENST00000416538 EXOC8Q8IYI6 725 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 GBP3Q9H0R5 595 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 ZBP1Q9H171 429 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 TUFT1Q9NNX1 390 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 FAM50BQ9Y247 325 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 VWA8A3KMH1 1905 aa16.8■□□□□ 0.28
UBXN4-203ENST00000416538 TTLL13PA6NNM8 815 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 ASAP2O43150 1006 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 EDN1P05305 212 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 ARF4P18085 180 aaPredicted RBP16.79■□□□□ 0.28
UBXN4-203ENST00000416538 MXD4Q14582 209 aaPredicted RBP16.79■□□□□ 0.28
UBXN4-203ENST00000416538 LLGL2Q6P1M3 1020 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 TMEM184AQ6ZMB5 413 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 MAEAQ7L5Y9 396 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 SUSD6Q92537 303 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 IGSF21Q96ID5 467 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 CDCA3Q99618 268 aaPredicted RBP16.79■□□□□ 0.28
UBXN4-203ENST00000416538 IPPQ9Y573 584 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 MUC6Q6W4X9 2439 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
UBXN4-203ENST00000416538 TRIOO75962 3097 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 KMT2EQ8IZD2 1858 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 INO80B-WBP1J3KQ70 363 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 GPR37L1O60883 481 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 ERLIN2O94905 339 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 SKIP12755 728 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 U2AF2P26368 475 aaKnown RBP eCLIP16.78■□□□□ 0.287e-7■■□□□ 11.9
UBXN4-203ENST00000416538 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 TMEM31Q5JXX7 168 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 POLR3CQ9BUI4 534 aaPredicted RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 APOL5Q9BWW9 433 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 S1PR5Q9H228 398 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 NXF3Q9H4D5 531 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 MARCH5Q9NX47 278 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 MUTYHQ9UIF7 546 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 HCFC2Q9Y5Z7 792 aa16.78■□□□□ 0.28
UBXN4-203ENST00000416538 MTCL1Q9Y4B5 1905 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
UBXN4-203ENST00000416538 CNTNAP2Q9UHC6 1331 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 F8W810 466 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 INPPL1O15357 1258 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 DCXO43602 365 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.28
UBXN4-203ENST00000416538 POMCP01189 267 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 RPA1P27694 616 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 MLH1P40692 756 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
UBXN4-203ENST00000416538 KRT17Q04695 432 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 SMC1AQ14683 1233 aaKnown RBP16.77■□□□□ 0.28
UBXN4-203ENST00000416538 RABEP1Q15276 862 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms