RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 RRN3P2A6NIE6 340 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 TADA2AO75478 443 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 DGAT1O75907 488 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-203ENST00000416188 PPP1R2P3Q6NXS1 205 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 DNAJC17Q9NVM6 304 aaKnown RBP16.69■□□□□ 0.26
PHRF1-203ENST00000416188 PPP1R9AQ9ULJ8 1098 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 ESYT2A0FGR8 921 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 PRPSAP2O60256 369 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 BBS9Q3SYG4 887 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 SLC4A1P02730 911 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 IRX4P78413 519 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 PPATQ06203 517 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 ARHGEF18Q6ZSZ5 1173 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 MYLK4Q86YV6 388 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 TMX2Q9Y320 296 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 TTC36A6NLP5 189 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 KRT10P13645 584 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 THPOP40225 353 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 NNTQ13423 1086 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 RNF219Q5W0B1 726 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 DNAJC12Q9UKB3 198 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 HBP1O60381 514 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 RFC1P35251 1148 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 DR1Q01658 176 aa16.68■□□□□ 0.26
PHRF1-203ENST00000416188 ZNF579Q8NAF0 562 aaKnown RBP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
PHRF1-203ENST00000416188 CYP2C8P10632 490 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 FMR1NBQ8N0W7 255 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-203ENST00000416188 GBP7Q8N8V2 638 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-203ENST00000416188 IGDCC4Q8TDY8 1250 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 FMO2Q99518 471 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 NOVA2Q9UNW9 492 aaKnown RBP16.67■□□□□ 0.26
PHRF1-203ENST00000416188 SRGAP2BP0DMP2 458 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 SERPINB6P35237 376 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 PRCPP42785 496 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 MXRA8Q9BRK3 442 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 SPATC1LQ9H0A9 340 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 CACYBPQ9HB71 228 aaKnown RBP16.67■□□□□ 0.26
PHRF1-203ENST00000416188 TUFT1Q9NNX1 390 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 SEL1LQ9UBV2 794 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 FGGP02679 453 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 MT-ND3P03897 115 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 KYAT1Q16773 422 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 KAZALD1Q96I82 304 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 GLTPD2A6NH11 291 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 GUCY1A2P33402 732 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 CASP8Q14790 479 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 SARM1Q6SZW1 724 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
PHRF1-203ENST00000416188 RASGRF2O14827 1237 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 ZNF560Q96MR9 790 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 GBP5Q96PP8 586 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 NOC2LQ9Y3T9 749 aaKnown RBP16.66■□□□□ 0.26
PHRF1-203ENST00000416188 UBR1Q8IWV7 1749 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 PRKCEQ02156 737 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 BFSP2Q13515 415 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 SLMAPQ14BN4 828 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 ERICH1Q86X53 443 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 FBXO16Q8IX29 292 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-203ENST00000416188 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 VCX3AQ9NNX9 186 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 EXOC1LA0A1B0GW35 172 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 ZNF18P17022 549 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 MAP2K2P36507 400 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 RWDD2BP57060 319 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 CDO1Q16878 200 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 HAUS6Q7Z4H7 955 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 TRIM56Q9BRZ2 755 aaKnown RBP16.66■□□□□ 0.26
PHRF1-203ENST00000416188 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
PHRF1-203ENST00000416188 NFU1Q9UMS0 254 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 GCLMP48507 274 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 ARL13BQ3SXY8 428 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 TMCO4Q5TGY1 634 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 CC2D1AQ6P1N0 951 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-203ENST00000416188 CAMKK2Q96RR4 588 aa16.66■□□□□ 0.26
PHRF1-203ENST00000416188 CPSF2Q9P2I0 782 aaKnown RBP16.66■□□□□ 0.26
PHRF1-203ENST00000416188 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 OPHN1O60890 802 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 SAAL1Q96ER3 474 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 MOV10L1Q9BXT6 1211 aaKnown RBP16.65■□□□□ 0.26
PHRF1-203ENST00000416188 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-203ENST00000416188 NR3C1P04150 777 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 SUPT20HL2P0C7V6 817 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 TCF7P36402 384 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-203ENST00000416188 FKBP1AP62942 108 aaKnown RBP16.65■□□□□ 0.26
PHRF1-203ENST00000416188 PCGF5Q86SE9 256 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 RHOT2Q8IXI1 618 aa16.65■□□□□ 0.26
PHRF1-203ENST00000416188 SOCS4Q8WXH5 440 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms