RNA–Protein interactions for RNA: ENST00000415469.5

LINC00858-201, long intergenic non-protein coding RNA 858, humanhuman

TSL 2 BASIC

Gene LINC00858, Length 2,685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-201ENST00000415469 NEK9Q8TD19 979 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 BTBD6Q96KE9 485 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 CELF4Q9BZC1 486 aaKnown RBP10.12□□□□□ -0.79
LINC00858-201ENST00000415469 KCNA2P16389 499 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 TNFAIP3P21580 790 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 MUTP22033 750 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
LINC00858-201ENST00000415469 PPP2R5AQ15172 486 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
LINC00858-201ENST00000415469 NFIL3Q16649 462 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 TREML2Q5T2D2 321 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 DCAF12L1Q5VU92 463 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 EEPD1Q7L9B9 569 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 NIPA1Q7RTP0 329 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 SLC47A2Q86VL8 602 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 C4orf19Q8IY42 314 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
LINC00858-201ENST00000415469 TMEM161BQ8NDZ6 487 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 SYT11Q9BT88 431 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 MOV10L1Q9BXT6 1211 aaKnown RBP10.12□□□□□ -0.79
LINC00858-201ENST00000415469 KMT5AQ9NQR1 393 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 TMOD4Q9NZQ9 345 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 FBXL5Q9UKA1 691 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 TBX20Q9UMR3 447 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 CENPFP49454 3210 aa10.12□□□□□ -0.79
LINC00858-201ENST00000415469 GOLGA6BA6NDN3 693 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 FZD9O00144 591 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 CYP26A1O43174 497 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 DSG3P32926 999 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 MXI1P50539 228 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 NCKAP1LP55160 1127 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 WNT7BP56706 349 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 GTF2BQ00403 316 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 PRKCEQ02156 737 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 NT5DC3Q86UY8 548 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 KREMEN1Q96MU8 473 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 PCDHB18PQ96TA0 734 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 TMEM206Q9H813 350 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 CYP39A1Q9NYL5 469 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 LOXHD1Q8IVV2 1947 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 POLR2AP24928 1970 aaKnown RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 ZBTB48P10074 688 aaPredicted RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 MCM3P25205 808 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 CNGA1P29973 690 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 JAK3P52333 1124 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 HNRNPH2P55795 449 aaKnown RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 KRT76Q01546 638 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 DMP1Q13316 513 aaPredicted RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 SEZ6Q53EL9 994 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 C2CD6Q53TS8 623 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 DCAF15Q66K64 600 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 SCARA3Q6AZY7 606 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 INTS8Q75QN2 995 aaKnown RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 NOP9Q86U38 636 aaKnown RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 SLC9A9Q8IVB4 645 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 GOLGA5Q8TBA6 731 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 FAM71BQ8TC56 605 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 TAS1R2Q8TE23 839 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 CTNNBL1Q8WYA6 563 aaPredicted RBP10.11□□□□□ -0.79
LINC00858-201ENST00000415469 POMGNT1Q8WZA1 660 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 BICD1Q96G01 975 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 TRIM31Q9BZY9 425 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 XPNPEP1Q9NQW7 623 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 PCDHA10Q9Y5I2 948 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 WDR81Q562E7 1941 aa10.11□□□□□ -0.79
LINC00858-201ENST00000415469 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
LINC00858-201ENST00000415469 CLSTN1O94985 981 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 TUBBP07437 444 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 MMEP08473 750 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 CAPN2P17655 700 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 ACTR2P61160 394 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 ERVK-9P63128 1117 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 GHRHRQ02643 423 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 KCTD16Q68DU8 428 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 SH2D3CQ8N5H7 860 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 KCTD17Q8N5Z5 321 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 ARL8AQ96BM9 186 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 KLRG1Q96E93 195 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 AGPAT1Q99943 283 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 FAM213AQ9BRX8 229 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 MTFR1LQ9H019 292 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 NEUROG2Q9H2A3 272 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 JPH1Q9HDC5 661 aaPredicted RBP10.1□□□□□ -0.79
LINC00858-201ENST00000415469 AMACRQ9UHK6 382 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 STXBP5LQ9Y2K9 1186 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 KRIT1O00522 736 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 HNRNPDLO14979 420 aaKnown RBP10.1□□□□□ -0.79
LINC00858-201ENST00000415469 STBD1O95210 358 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 KRT14P02533 472 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 FTLP02792 175 aaPredicted RBP10.1□□□□□ -0.79
LINC00858-201ENST00000415469 HARSP12081 509 aaKnown RBP10.1□□□□□ -0.79
LINC00858-201ENST00000415469 LMNB1P20700 586 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 ITIH3Q06033 890 aa10.1□□□□□ -0.79
LINC00858-201ENST00000415469 HLTFQ14527 1009 aaKnown RBP eCLIP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms