RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 SLC24A5Q71RS6 500 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 ZNF410Q86VK4 478 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 CMTR2Q8IYT2 770 aaKnown RBP10.7□□□□□ -0.7
LINC01090-201ENST00000415357 RNF169Q8NCN4 708 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 PRR7Q8TB68 274 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 PRPF31Q8WWY3 499 aaKnown RBP10.7□□□□□ -0.7
LINC01090-201ENST00000415357 PSPC1Q8WXF1 523 aaKnown RBP10.7□□□□□ -0.7
LINC01090-201ENST00000415357 TSC1Q92574 1164 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 SAMD11Q96NU1 681 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 C1orf112Q9NSG2 853 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 RNF19AQ9NV58 838 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 THEGQ9P2T0 379 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
LINC01090-201ENST00000415357 TBKBP1A7MCY6 615 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 H3BNC9 293 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 H3BQV1 296 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 GRM6O15303 877 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 USO1O60763 962 aaKnown RBP10.69□□□□□ -0.7
LINC01090-201ENST00000415357 LILRB3O75022 631 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
LINC01090-201ENST00000415357 BMPR1AP36894 532 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 RARRES1P49788 294 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 FAM189BP81408 668 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 TFF2Q03403 129 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 LAMTOR4Q0VGL1 99 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 CATSPER4Q7RTX7 472 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 CATSPER3Q86XQ3 398 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 ECHDC2Q86YB7 292 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 ASAP3Q8TDY4 903 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
LINC01090-201ENST00000415357 CCDC43Q96MW1 224 aaKnown RBP10.69□□□□□ -0.7
LINC01090-201ENST00000415357 MINDY3Q9H8M7 445 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 ATP6V0A4Q9HBG4 840 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 ANKEF1Q9NU02 776 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 TMEM161AQ9NX61 479 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 PIN4Q9Y237 131 aaKnown RBP10.69□□□□□ -0.7
LINC01090-201ENST00000415357 PPME1Q9Y570 386 aa10.69□□□□□ -0.7
LINC01090-201ENST00000415357 ATG2AQ2TAZ0 1938 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 FNDC1Q4ZHG4 1894 aaPredicted RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 PP2D1A8MPX8 630 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 C5orf67F2Z3F1 127 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 DLL1O00548 723 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 ATF7P17544 494 aaPredicted RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 SFPQP23246 707 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 CUL4AQ13619 759 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 IL17AQ16552 155 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 ECM1Q16610 540 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 MAEAQ7L5Y9 396 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 FERMT3Q86UX7 667 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 MRPL38Q96DV4 380 aaKnown RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 POLR3CQ9BUI4 534 aaPredicted RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 TUFT1Q9NNX1 390 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 ALG13Q9NP73 1137 aaKnown RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 GPRC5CQ9NQ84 441 aa10.68□□□□□ -0.7
LINC01090-201ENST00000415357 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.68□□□□□ -0.7
LINC01090-201ENST00000415357 MEIS3P2A8K0S8 358 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CFAP99D6REC4 459 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 DGAT1O75907 488 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 RPA1P27694 616 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CDC25AP30304 524 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CCT6AP40227 531 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CDC42EP1Q00587 391 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CAPSQ13938 189 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CLLU1OSQ5K130 101 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 SPOUT1Q5T280 376 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 LARP1BQ659C4 914 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 TWF2Q6IBS0 349 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 EXOC8Q8IYI6 725 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 ERMNQ8TAM6 284 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 HELQQ8TDG4 1101 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 LPPQ93052 612 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 CASD1Q96PB1 797 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 C11orf84Q9BUA3 381 aaPredicted RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 INO80BQ9C086 356 aaPredicted RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 POLR3FQ9H1D9 316 aaPredicted RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 ELAC1Q9H777 363 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 AGPAT5Q9NUQ2 364 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 TYW1Q9NV66 732 aaKnown RBP10.67□□□□□ -0.7
LINC01090-201ENST00000415357 LMCD1Q9NZU5 365 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 LRWD1Q9UFC0 647 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 RWDD3Q9Y3V2 267 aa10.67□□□□□ -0.7
LINC01090-201ENST00000415357 A0A0U1RQF3 1178 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
LINC01090-201ENST00000415357 ARHGEF35A5YM69 484 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 ITGB1P05556 798 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 RB1P06400 928 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 JUNDP17535 347 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 GLRA2P23416 452 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 DNAJB1P25685 340 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 ARL2P36404 184 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 PBX3P40426 434 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 PHKA2P46019 1235 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms