RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 XKR3Q5GH77 459 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 SPECC1Q5M775 1068 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 POTEGQ6S5H5 508 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 ZNF410Q86VK4 478 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 ST13P5Q8NFI4 369 aaPredicted RBP17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 CCDC12Q8WUD4 166 aaPredicted RBP17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 TBC1D17Q9HA65 648 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 IFT122Q9HBG6 1241 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 WDR6Q9NNW5 1121 aaKnown RBP17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 VPS54Q9P1Q0 977 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 FAN1Q9Y2M0 1017 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 MIA3Q5JRA6 1907 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 COL4A3Q01955 1670 aa17.9■□□□□ 0.46
SYNGR1-206ENST00000415332 INPPL1O15357 1258 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 TEX28O15482 410 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 MAFO75444 373 aaPredicted RBP17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 SOD2P04179 222 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 DCNP07585 359 aaKnown RBP17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 DNM2P50570 870 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 RCAN1P53805 252 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 AK2P54819 239 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 TSGA10IPQ3SY00 556 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 UBXN11Q5T124 520 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 PLA2G4FQ68DD2 849 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 B3GNT9Q6UX72 402 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 MRPL10Q7Z7H8 261 aaKnown RBP17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 CMASQ8NFW8 434 aaPredicted RBP17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 URGCPQ8TCY9 931 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 GPR152Q8TDT2 470 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 PGBD4Q96DM1 585 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 TMEM175Q9BSA9 504 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 INO80BQ9C086 356 aaPredicted RBP17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 MINDY3Q9H8M7 445 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 RSAD1Q9HA92 442 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 AGPAT5Q9NUQ2 364 aa17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 PRG3Q9Y2Y8 225 aaPredicted RBP17.89■□□□□ 0.45
SYNGR1-206ENST00000415332 DDX11L8A8MPP1 907 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 F8W810 466 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 SPATA31D3P0C874 917 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 USP11P51784 963 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 SPATA31D4Q6ZUB0 917 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 Q6ZUG5 572 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 ANO5Q75V66 913 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 DCLK2Q8N568 766 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 ZNF707Q96C28 371 aaPredicted RBP17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 FAM193BQ96PV7 902 aaPredicted RBP17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 RPS6KC1Q96S38 1066 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 HERC2P3Q9BVR0 1158 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 EPS15L1Q9UBC2 864 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 CLUHO75153 1309 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 NCOR2Q9Y618 2525 aa17.88■□□□□ 0.45
SYNGR1-206ENST00000415332 TDP2O95551 362 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 EFEMP2O95967 443 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 URODP06132 367 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 SRFP11831 508 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 HOXA11P31270 313 aaPredicted RBP17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 NTRK3Q16288 839 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 KIAA0319Q5VV43 1072 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 DGLUCYQ7Z3D6 616 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 SKAP1Q86WV1 359 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 RNF168Q8IYW5 571 aaPredicted RBP17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 RDM1Q8NG50 284 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 TBCKQ8TEA7 893 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 SEMA4AQ9H3S1 761 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 DLGAP2Q9P1A6 1054 aa17.87■□□□□ 0.45
SYNGR1-206ENST00000415332 ARID2Q68CP9 1835 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 FRYLO94915 3013 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 CCDC196A0A1B0GTZ2 297 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 POTEMA6NI47 508 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 GLUD1P00367 558 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 SP9P0CG40 484 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 RFX1P22670 979 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 NPEPPSP55786 919 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 Q4G0T1 1027 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 COLGALT2Q8IYK4 626 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 SMG8Q8ND04 991 aaKnown RBP17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 BICD2Q8TD16 824 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 SMG7Q92540 1137 aaKnown RBP17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 BRF1Q92994 677 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 B3GALT6Q96L58 329 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 MIOSQ9NXC5 875 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 COL4A3BPQ9Y5P4 624 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 NID2Q14112 1375 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 GPR179Q6PRD1 2367 aa17.86■□□□□ 0.45
SYNGR1-206ENST00000415332 EML1O00423 815 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 LRRN2O75325 713 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 NEFLP07196 543 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 ADH1AP07327 375 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 SRGAP2CP0DJJ0 459 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 GLULP15104 373 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 OR1G1P47890 313 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 FGD1P98174 961 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 CACNA1BQ00975 2339 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 PALB2Q86YC2 1186 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 PATJQ8NI35 1801 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 STAMQ92783 540 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 TMEM143Q96AN5 459 aa17.85■□□□□ 0.45
SYNGR1-206ENST00000415332 SLC26A6Q9BXS9 759 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms